Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1438 ATGGTGCTGCTAAGATGCTTCTATGTGACACTTTTGCAGTGGTGTTTCTTGGCTTGTTTACTTGACTTATCAGTGGGTCTTAACAACCGAGCACCTTCATGTGACATGCATGATTTATCAGCCCTTAAGGAATTTGCACACAACCTGACTAAAGGCTCTATCATAACAGCATGGTCCAATGATACTATATGCTGCAACTGGGTTGGAGTTGTATGTGATAATGCAACTGGTGGTGGAAGAGTGACCAAGTTGGTTCTGCCTGGAATGGATCTTAATGGAACAATTTCACCTTCTCTAGCTCAGCTAGATCAGCTCATTTTGCTGAATCTCTCATTGAATCGTCTTGTTGGTGAAATTCCTATAGAGTTCTCCAAGATGAAGCAGTTGAGGTTTCTTGACTTGAGCCATAATATGCTGTCAGGACAAGTTGCTGGTGCACTTTCTGGTTTGCAACCTATTGAAGTATTGAATATTTCTAGCAATTTGTTTTCTGGTGATCCCTTCTTTCAACTTGGAGAATTCCAACATCTCCTTGCTCTCAACATGAGTAACAATTCATTCACTGGCAGGTTCAATTCTCAAATTTGCAGTGCTACCAAGGGCCTTCACACCCTTGATTTATCTGAAAATCACTTTGTTGGTGATCTTGAAGGCTTGGGCAATTGCAGCACATCACTCCAACAGTTGCATTTGGATTCCAATTCATTTTCTGGTTCTCTTCCAGATTCCTTGTATTCAATGTCAGCCTTAGAGAAATTCTCAGTCTCTGACAACAATTTATCTGGCAACTTAAGCAAAGAACTTAATAAGCTTTCTAGACTAAAAGCTCTATTGGTTTCTGGTAACCAGTTTTCAGGTGAACTCCCAAATGTGTTTGGTAATCTTTTGCAGCTAGAACAATTAGTAGCACACTCCAATTCAATTTCTGGATCTTTACCTTCCACTTTGGCTTTATGCTCAAAACTTAGAGTGATTGATCTTAGAAATAATTCCTTGTCAGGTACTATTGATCTTGATTTCAGTAGGTTGTCTAATCTTTACACACTTGACCTTGCTAGTAATCATTTTACTGGACCACTTCCAAGTTCCTTGGCCAATTGCCACGAACTGAAACTTTTAAGCCTTGCTAAGAATGGTTTAAATGGCTCTATCCCTGAAAGTTATGCCAACCTCACTTCTCTTTCATTTGTGTCCATGTCAAACAACAGCTTAGAGAACTTGTCTGGGTCATTGTCTGCTCTGCAGCATTGCAAAAACCTCACTACTCTTATCCTCACCAAGAACTTCCATGGTGAGGAAATTCCAGAAAACATAGTAGCAGGATTTGATAGCCTTATGGTTTTGGCTCTTGGAAATTGTGGCCTTAATGGCCATATTCCTTCTTGGCTGTTGAATTGCCGGAAGTTGGGAGTCCTTGATTTGTCTTGGAATCATCTGAATGGTAGTATTCCTTCATGGATCGGTCGAATGGACAATTTGTTTTACTTGGATTTCTCAAACAATTCTCTCACAGGAGAAATACCAAAAAGTTTGACAGAGTTGAGGGGCCTTATTACCCCAAATTGCAGCAGATCAAATTTCACTGTATCTGTGGGCATTCCTCTTCTTGTCAAGAGAAACAAGAGTGCTAGTGGGCTGCAATATAACCAAGTATCAAGTTTCCCTCCTTCAATATACTTGAGCAACAACAGTTTAAGTGGAAATATATGGCCTGAAATTGGTCAATTGAAAGCACTGCATGTCTTGGATTTAAGCCGGAACAACATCACCGGTACCATTCCCAGCTCTATTTCTGAGATCGAGAACTTGGAAACATTGGATTTATCATATAATGATCTCAGTGGAACAATTCCTCCGTCATTTAACAACCTCACATTCTTGTCTAAGTTTAGTGTGGCATATAATCGCTTGCAGGGATCAATTCCAACCGGTGGGCAGTTTTTAAGTTTCCCTAGTTCAAGCTTTGAGGGCAACCTGGGCCTTTGTAGTGACATTGATTCTCCTTGCAAAACTGTAAATCTGGGGGAGTTGAAACCTAATATTTCTTCTGCTTCTGCGAGAAAGTTCGGTAAAGGCAGTGTACTTGGCATAACAATCGGCGTCGGGATAGGGCTTGCACTGCTCCTAGCAGTTATTGTGCTAAAAATGTCAAAGAGGGATGAGGATAAGCCAATCGACAACAATGATGAGGAATTCAGTAGTAGGCCACACAGGTTATCTGGAGCACTTGTTTCCTCAAAACTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTTCAGATTTGTTAAAATCCACAAACAATTTCAACCCAGCAAATATTGTTGGTTGTGGTGGATTTGGTCTTGTCTACAAGGCTAATCTTCCAAATGGCACAAAAGCAGCTATCAAAAGACTTTCTGGGGAATGTGGTCAGATGGAACGGGAATTCCAAGCTGAAGTCGAGGCCCTCTCAAGAGCTCAACACAATAATCTTGTTTCTCTTAAAGGTTATTGTCGGCATGGCAACGACAGATTGCTGATATACTCATACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAAAGTTCAGCTCTAACTTGGGGTGTGAGACTCAAGATCGCACAAGGCGCTGCTTGTGGATTAGCTTACTTGCACAAGGGGTGTGAGCCATACATAGTGCATCGAGATGTAAAATCTAGCAACATACTGTTGGATGATAAGTTTGAAGCTCATTTAGCTGATTTTGGTCTCTCAAGGCTACTTCAACCTTATGATACTCATGTCACAACAGATTTAGTTGGGACATTAGGATACATTCCTCCAGAATATGGTCAAACATTGACAGCAACCTTCAGAGGTGATGTTTATAGTTTCGGTGTCGTTCTTCTCGAGCTTCTTACTGGTAGAAGGCCTGTAGAAGTCATGAAGGGGAAAAATTGCAGGAATCTGGTTTTTTGGGTGTTTGAGATGAAATCTGAGAATAAGGAGCAGGAAATCTTTGACCCAGCCATTTGGCATAAGGATCATGAGAAACAGCTTTTGGAGGTGCTGGCCATTGCTTGTAAATGCCTAGACCAAGATCCAAGGCAGAGACCCTCCACTGAATCAGTTGTTTCATGGCTTGATGGTGTAAGATTTGATAGCCCTCAACAGTGA 3159 0.4122 MVLLRCFYVTLLQWCFLACLLDLSVGLNNRAPSCDMHDLSALKEFAHNLTKGSIITAWSNDTICCNWVGVVCDNATGGGRVTKLVLPGMDLNGTISPSLAQLDQLILLNLSLNRLVGEIPIEFSKMKQLRFLDLSHNMLSGQVAGALSGLQPIEVLNISSNLFSGDPFFQLGEFQHLLALNMSNNSFTGRFNSQICSATKGLHTLDLSENHFVGDLEGLGNCSTSLQQLHLDSNSFSGSLPDSLYSMSALEKFSVSDNNLSGNLSKELNKLSRLKALLVSGNQFSGELPNVFGNLLQLEQLVAHSNSISGSLPSTLALCSKLRVIDLRNNSLSGTIDLDFSRLSNLYTLDLASNHFTGPLPSSLANCHELKLLSLAKNGLNGSIPESYANLTSLSFVSMSNNSLENLSGSLSALQHCKNLTTLILTKNFHGEEIPENIVAGFDSLMVLALGNCGLNGHIPSWLLNCRKLGVLDLSWNHLNGSIPSWIGRMDNLFYLDFSNNSLTGEIPKSLTELRGLITPNCSRSNFTVSVGIPLLVKRNKSASGLQYNQVSSFPPSIYLSNNSLSGNIWPEIGQLKALHVLDLSRNNITGTIPSSISEIENLETLDLSYNDLSGTIPPSFNNLTFLSKFSVAYNRLQGSIPTGGQFLSFPSSSFEGNLGLCSDIDSPCKTVNLGELKPNISSASARKFGKGSVLGITIGVGIGLALLLAVIVLKMSKRDEDKPIDNNDEEFSSRPHRLSGALVSSKLVLFQNSDCKDLTVSDLLKSTNNFNPANIVGCGGFGLVYKANLPNGTKAAIKRLSGECGQMEREFQAEVEALSRAQHNNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDESSALTWGVRLKIAQGAACGLAYLHKGCEPYIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYGQTLTATFRGDVYSFGVVLLELLTGRRPVEVMKGKNCRNLVFWVFEMKSENKEQEIFDPAIWHKDHEKQLLEVLAIACKCLDQDPRQRPSTESVVSWLDGVRFDSPQQ 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1438 1052 Pfam Protein kinase domain 775 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1438 1052 CDD STKc_IRAK 777 1044 - -
Lal11g1438 1052 SUPERFAMILY L domain-like 222 508 - -
Lal11g1438 1052 Gene3D Ribonuclease Inhibitor 363 674 IPR032675 -
Lal11g1438 1052 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Lal11g1438 1052 Pfam Leucine Rich Repeat 321 342 IPR001611 GO:0005515
Lal11g1438 1052 Gene3D Ribonuclease Inhibitor 33 262 IPR032675 -
Lal11g1438 1052 ProSiteProfiles Leucine-rich repeat profile. 602 624 IPR001611 GO:0005515
Lal11g1438 1052 ProSiteProfiles Protein kinase domain profile. 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1438 1052 Gene3D Phosphorylase Kinase; domain 1 737 846 - -
Lal11g1438 1052 Gene3D Ribonuclease Inhibitor 263 361 IPR032675 -
Lal11g1438 1052 PRINTS Leucine-rich repeat signature 129 142 - -
Lal11g1438 1052 PRINTS Leucine-rich repeat signature 600 613 - -
Lal11g1438 1052 SMART LRR_typ_2 126 149 IPR003591 -
Lal11g1438 1052 SMART LRR_typ_2 490 514 IPR003591 -
Lal11g1438 1052 SMART LRR_typ_2 271 294 IPR003591 -
Lal11g1438 1052 SMART LRR_typ_2 576 599 IPR003591 -
Lal11g1438 1052 SMART LRR_typ_2 391 414 IPR003591 -
Lal11g1438 1052 SMART LRR_typ_2 600 623 IPR003591 -
Lal11g1438 1052 SMART LRR_typ_2 343 366 IPR003591 -
Lal11g1438 1052 SUPERFAMILY L domain-like 453 662 - -
Lal11g1438 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 613 1045 - -
Lal11g1438 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 279 436 - -
Lal11g1438 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 156 - -
Lal11g1438 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 153 260 - -
Lal11g1438 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 558 615 - -
Lal11g1438 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 447 518 - -
Lal11g1438 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Lal11g1438 1052 ProSitePatterns Protein kinases ATP-binding region signature. 777 799 IPR017441 GO:0005524
Lal11g1438 1052 SUPERFAMILY Protein kinase-like (PK-like) 753 1042 IPR011009 -
Lal11g1438 1052 Pfam Leucine rich repeat 578 637 IPR001611 GO:0005515
Lal11g1438 1052 Gene3D Transferase(Phosphotransferase) domain 1 847 1051 - -
Lal11g1438 1052 SMART serkin_6 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1438 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 558 615 - -
Lal11g1438 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 279 436 - -
Lal11g1438 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 447 518 - -
Lal11g1438 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 156 - -
Lal11g1438 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 613 1045 - -
Lal11g1438 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 153 260 - -
Lal11g1438 1052 SUPERFAMILY L domain-like 51 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1438 Lal-Chr11 17751091 17754249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1438 1 1051 Receptor kinase-like Gene Family AT1G55610 33.276 1.29e-163 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lal11g1438 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1438 - - gmx:100797812 1655.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1438 11 17751091 17754249 Lal11g1438 11 17751091 17754249 ECH