Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1434 ATGAAGATTCAGAGACTTATCTGTCTCTTATTGGTTCTGTTTAGTTTAATTTCAAGCTCCCAAGCCTACAAATTCTACGTTGGTGGAAAATATGGTTGGGTTCTTAACCATTCTGAGGATTACAATCCATGGGCTGAAAGGAACAGGTTCCAAGTTGGTGATTCACTATTTTTTAAGTATGAGAAGGGGTCAAACTCAGTGTTGGTGGTGAACAAGGATGATTATGAAAAATGTTACAAGAAGAAACCATTGAAGAAGTTTGAGGATGGAAACACTGAGTTCCAAATTGATAGATCAGGTCCTTATTTCTTCATTAGTGGCAAAGATGATAATTGTGAAAAGGGTCAGAAACTTATTGTTGTGGTCTTGGCTTTGAGACCCCCACCTCCAAATGTTCCTTCTACACCTAAAGCTCCATCACCCTATGTCCCAACACCTTCACAAACTCCTTCTCCTCTTAAAGCTCCTTCCCCTAGTACTAACACTCCTTCTCCTATTTCTCAACCTCCATATATATCAACTTCTCCACAAAGTGGTAACCCTATTTCACAGCCTCCAAAAGCTCCATCCCCAAACACTCATTCTCATATTTCTGAACCACCCTCTGCACTAACACCTCAAAAAAGTCCCTCTCCATTTTCACAAGCACCTTATACTCAAACTCCAACTCCAACAAAGTCAACTTCCCCTATTTCTCAACCTCCATTAGTAGCACAAACACCAAGAGATAGTAGGGCACCAGTTCATTCACCAACAGTGCCATCTCCATCACCTATTTCACCATCCACACAAACATCATCATCATCACCATATTCTAACTCTCCATCTTCACTTTCTCCATCCATTGCACCTTCTGTTATAACTCCAGCAACCTCTCCGGTCTCCGATACATCTCCTATAGCATCATCGCCTCCGTCATCATCGTTGAGTCCCGGAGGTTCCGAAACAACACCATCGTCAAATGAAACAGCACCAGCTCCACCAAACCGTACGTCGTTTGCATGGGCTGCGACGCCATCAGGGTTATGTGTATATTCAGTTACAATTTTAGTTGGTTTTGCTCTCACTACTTAG 1074 0.4227 MKIQRLICLLLVLFSLISSSQAYKFYVGGKYGWVLNHSEDYNPWAERNRFQVGDSLFFKYEKGSNSVLVVNKDDYEKCYKKKPLKKFEDGNTEFQIDRSGPYFFISGKDDNCEKGQKLIVVVLALRPPPPNVPSTPKAPSPYVPTPSQTPSPLKAPSPSTNTPSPISQPPYISTSPQSGNPISQPPKAPSPNTHSHISEPPSALTPQKSPSPFSQAPYTQTPTPTKSTSPISQPPLVAQTPRDSRAPVHSPTVPSPSPISPSTQTSSSSPYSNSPSSLSPSIAPSVITPATSPVSDTSPIASSPPSSSLSPGGSETTPSSNETAPAPPNRTSFAWAATPSGLCVYSVTILVGFALTT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1434 357 Gene3D - 21 125 IPR008972 -
Lal11g1434 357 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Lal11g1434 357 MobiDBLite consensus disorder prediction 166 181 - -
Lal11g1434 357 PRINTS Proline rich extensin signature 127 139 - -
Lal11g1434 357 PRINTS Proline rich extensin signature 147 168 - -
Lal11g1434 357 PRINTS Proline rich extensin signature 170 186 - -
Lal11g1434 357 PRINTS Proline rich extensin signature 188 205 - -
Lal11g1434 357 PRINTS Proline rich extensin signature 210 235 - -
Lal11g1434 357 MobiDBLite consensus disorder prediction 189 239 - -
Lal11g1434 357 MobiDBLite consensus disorder prediction 259 332 - -
Lal11g1434 357 CDD OsENODL1_like 23 123 IPR041846 -
Lal11g1434 357 PANTHER BLUE COPPER PROTEIN 1 213 IPR039391 GO:0009055
Lal11g1434 357 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 213 - -
Lal11g1434 357 MobiDBLite consensus disorder prediction 126 332 - -
Lal11g1434 357 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Lal11g1434 357 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Lal11g1434 357 MobiDBLite consensus disorder prediction 126 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1434 Lal-Chr11 17722975 17729549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1434 3 195 Phytocyanin Superfamily AT5G53870 47.739 1.27e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1434 - - lang:109334791 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1434 11 17722975 17729549 Lal11g1434 11 17722975 17729549 ECH