Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1429 ATGGAGGGTTCTTCTGGTTCTGCTTGGCAGAAATCTGGAAGTTCTAGGGGATTAAATGGTTCTGGAGTCTCAGACAGGAACCAAAGGCTTCATTCTCCGGAAAGAAACCCCTTCTCCGGTGATGCATCACAGGATTCTGGCTTTAAAGCAGAAAGAAATATGGCTCTATCGGCACATGGTGATCATCAGCCAAAAAATCTGGGTAGGTTTTCTGGTTTTTCCGAGGATGATGTGGGGGTTGACCCTTTTGTTTGTTCTATAGAATGGGGTGATGTTAGCTTGAGGCAATGGGTAGATAAACCGGAACGAGCTGTTGATGTTTTCGAGTGCTTGCACATATTTAGGCAAATAGTAGAAATTGTTAATGCAGCACATTCTCAAGGAGTTGTAGTTCATAATGTGAGGCCTTCCTGCTTTGTCATGTCATCTTTCAACCATATCTCATTTATTGAATCAGCGTCTTGTTCAGATTCAAGCTCCGATTCTTTAGGAGATGGACGGAACAACCAAGGTGTTGAGATTAAAAAATTAATGTCTACGTATCAGCAGAGTGTAGGAAGTGAAGATTTTGTGCCTGGCAAGACTTCAACAACTGGTTTATCAGATTCTAGTTGCATGCTGTCAAGTGCTGTGTATGCTGCCCGAGCATCGTTAATAGAAGAAACAGAAGAAAATAAAATAAAAGATAGCCGAAAGGCTGAAGAAGTGGAAGGAAAGAAACAATCATTTCCAATGAAACAGATACTGCAAATGGAAATGAGTTGGTATTCTAGTCCTGAAGAGCTTGCTGGCACTCCTAGTTCTTGTGCTTCAGATGTTTACCGATTGGGGGTTCTCCTTTTTGAGCTATTCTGTCCACTGAGCTCAAGGGAAGAAAAGAGTAGAACTATGTCTAGCCTTAGACATAGAGTTCTTCCTCCACAGTTGCTTCTAAAGTGGCCTAAGGAAGCCTCATTTTGCTTATGGTTACTGCACCCTGACCCTAGTACTCGTCCAGCGTTGGGGGAATTGTTGCAGAGTGAGTTTCTCAATGAACAAAGAGATGATATGGAAGAACGTGAAGCAGCGATAGAGCTTAGACAAAGGATAGAGGATCAGGAATTGCTGCTTGAATTTCTTTTGTTACTTCAGCAAAAAAAACGAGAAGTTGCTGAGAAGCTGCAACATACTATCTCTTTTCTGTGTTCAGATATTGAAGAAGTGGCCAAGCAGCAAACTAGATTTAAAGAGATTACTGGCGCTGAACTAGGGAGTGATGATCGTTCAGCATCAAGTTTCCCAATCATGACGGTTATTGATAGTGATGATTCTGCTTGTCCAGGGACCAGAAAACGAGTCAGACCAGGGATGCATGCTAAAAACATCGAGGAATGTGATGATAGATTAGGTGATGATCAGAATAATCATGAAAGCTTTCTTTCAAAAAATTCACGGCTAATGAAGAACTTCAAGAAGCTAGAGTCAGCTTACTTTTTAACACGATGCAGACCTACCTATTCATCAGGGAAACAGGTGGTTAGACATTCACCGACAACAAATGATGGTAGAGGGTCTGTTGTCATGAGTGAAAGTTGTGTCAATAACTTAGCATCCAGAGAGCAGTGCAGGGATGGAAAAGCTTGGATAAATCCTTTCCTCGAGGGTTTGTGCAAGTACTTATCTTTCAGTAAGCTAAAAGTTAAGGCTGACCTGAAGCAAGGTGATCTTTTGCATTCATCAAACCTAGGATGTGCACTCAGTTTTGATCGCGATGGAGATTTTTTTGCTACTGCTGGTGTGAATAAGAAAATTAAAGTTTTTGAATGTGATACAATCATAAATGAGGATCGTGATATCCATTATCCAGTTGTGGAGATGGCTAGCAGGTCAAAGTTGAGCAGTATATGTTGGAATACTTACATCAAAAGTCAAATTGCTTCAAGTAACTTTGAAGGTGTTGTACAGTTATGGGATGTTACAAGAAGTCAAATACTGTCAGAAATGAAGGAGCATGAGCGGCGAGTGTGGTCCATTGATTTCTCATCAGCAGACCCGACAATGTTGGCAAGTGGGAGCGATGACGGTTCTGTTAAGCTATGGAGTATCAATCAGGCAATTCAATTTTTGCATTTGGTGGATGTCAGCTTTGAAACTAAACGTACTACAGTCATCTATTGCATGTTTTATGGAGTAAGCATTGGCACCATCAAAACGAAGGCAAATATATGCTGCGTTCAGTTCCCTCCAGACTCTGCTACTTCTCTCGCATTTGGTTCTGCAGATCACCGAATATATTACTATGATCTTCGCAGCCTAAAAGCGCCACTTTGCACATTAGTTGGACATAATAAGACTGTGAGCAACATCAAGTTTGTAGATAGTGTGAACCTTGTCTCCGCTTCCACGGATAACACTTTGAAGCTTTGGGATTTATCCAAGTGTGCATCTCGAGTTATAAACACGCCGATTCAATCATTCACTGGTCACATGAATGTTAAGAACTTCGTAGGGTTGTCAGTATCTGATGGTTATATCGCTACCGGTTCAGAGACAAATGAGGTGTTCATATACCACAAGGCCTTTCCCATGCCAGCATTGTCATTCAAGTTTCAGAACACAGACCCACTTTCGGGTCATGAAGTTGATGATGCTGCACAATTCGTCTCTTCTGTTTGCTGGCGCGGTCAATCTTCGACTTTAGTTGCTGCAAATTCGACAGGGAATGTCAAAATTCTGGAGATGGTTTGA 2727 0.4162 MEGSSGSAWQKSGSSRGLNGSGVSDRNQRLHSPERNPFSGDASQDSGFKAERNMALSAHGDHQPKNLGRFSGFSEDDVGVDPFVCSIEWGDVSLRQWVDKPERAVDVFECLHIFRQIVEIVNAAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDSSSDSLGDGRNNQGVEIKKLMSTYQQSVGSEDFVPGKTSTTGLSDSSCMLSSAVYAARASLIEETEENKIKDSRKAEEVEGKKQSFPMKQILQMEMSWYSSPEELAGTPSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSTRPALGELLQSEFLNEQRDDMEEREAAIELRQRIEDQELLLEFLLLLQQKKREVAEKLQHTISFLCSDIEEVAKQQTRFKEITGAELGSDDRSASSFPIMTVIDSDDSACPGTRKRVRPGMHAKNIEECDDRLGDDQNNHESFLSKNSRLMKNFKKLESAYFLTRCRPTYSSGKQVVRHSPTTNDGRGSVVMSESCVNNLASREQCRDGKAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLGCALSFDRDGDFFATAGVNKKIKVFECDTIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMKEHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAIQFLHLVDVSFETKRTTVIYCMFYGVSIGTIKTKANICCVQFPPDSATSLAFGSADHRIYYYDLRSLKAPLCTLVGHNKTVSNIKFVDSVNLVSASTDNTLKLWDLSKCASRVINTPIQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPLSGHEVDDAAQFVSSVCWRGQSSTLVAANSTGNVKILEMV 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1429 908 Gene3D - 547 908 IPR015943 GO:0005515
Lal11g1429 908 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 772 805 - -
Lal11g1429 908 ProSiteProfiles Protein kinase domain profile. 1 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1429 908 ProSiteProfiles Trp-Asp (WD) repeats profile. 661 696 IPR001680 GO:0005515
Lal11g1429 908 ProSiteProfiles Trp-Asp (WD) repeats profile. 772 805 IPR001680 GO:0005515
Lal11g1429 908 Gene3D Transferase(Phosphotransferase) domain 1 91 356 - -
Lal11g1429 908 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 661 696 - -
Lal11g1429 908 MobiDBLite consensus disorder prediction 1 43 - -
Lal11g1429 908 ProSitePatterns Trp-Asp (WD) repeats signature. 790 804 IPR019775 -
Lal11g1429 908 PANTHER PROTEIN SPA1-RELATED 2 1 908 IPR044630 GO:0009640
Lal11g1429 908 SUPERFAMILY Protein kinase-like (PK-like) 66 355 IPR011009 -
Lal11g1429 908 SUPERFAMILY WD40 repeat-like 577 906 IPR036322 GO:0005515
Lal11g1429 908 SMART WD40_4 612 651 IPR001680 GO:0005515
Lal11g1429 908 SMART WD40_4 654 694 IPR001680 GO:0005515
Lal11g1429 908 SMART WD40_4 722 761 IPR001680 GO:0005515
Lal11g1429 908 SMART WD40_4 862 906 IPR001680 GO:0005515
Lal11g1429 908 SMART WD40_4 812 851 IPR001680 GO:0005515
Lal11g1429 908 SMART WD40_4 566 601 IPR001680 GO:0005515
Lal11g1429 908 SMART WD40_4 765 803 IPR001680 GO:0005515
Lal11g1429 908 Coils Coil 219 239 - -
Lal11g1429 908 SMART serkin_6 2 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1429 908 MobiDBLite consensus disorder prediction 1 46 - -
Lal11g1429 908 Pfam WD domain, G-beta repeat 657 694 IPR001680 GO:0005515
Lal11g1429 908 Pfam WD domain, G-beta repeat 768 803 IPR001680 GO:0005515
Lal11g1429 908 PRINTS G protein beta WD-40 repeat signature 638 652 IPR020472 -
Lal11g1429 908 PRINTS G protein beta WD-40 repeat signature 681 695 IPR020472 -
Lal11g1429 908 PRINTS G protein beta WD-40 repeat signature 790 804 IPR020472 -
Lal11g1429 908 Coils Coil 340 360 - -
Lal11g1429 908 Pfam Protein tyrosine and serine/threonine kinase 213 336 IPR001245 GO:0004672|GO:0006468
Lal11g1429 908 PANTHER PROTEIN SPA1-RELATED 3 1 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1429 Lal-Chr11 17677407 17682573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1429 635 835 U-box Gene Family AT1G04510 24.229 1.17e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Lal11g1429 PK_Tyr_Ser-Thr 1.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1429 - - gmx:100811457 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1429 11 17677407 17682573 Lal11g1429 11 17677407 17682573 ECH
Lal20g0334 20 2697383 2702883 Lal11g1429 11 17677407 17682573 LSH