Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1405 GTAGATATGGATCAAGAGATTTCAGACATTGAATCTCAAACTATTTACAAAACAACACTGCAAGAAGAAGCACCTCATATTTCTCACAAGGCAAAAAAATGTCATGTAATTCTCAAGTTTGATGATGTTACTTATAAAATTAAGACCAAAAAAGGAAAACTACTTGATAAGAAGACAATGGAAGAAGAAAAAGTGATACTGAAAGGAGTAACAGGAATTGTTGAACCTGGTGAAATTCTAGCCATGTTAGGTCCCTCTGGAAGTGGAAAAACAACTCTTCTAACAGCTTTAGGAGGAAGACTTGGAGGGAAACTTCATGGAACTATAACTTACAATGGACAACCTTTGTCAAATGTAATAAAAAGGAACAGTGGTTTTGTTACTCAAGATGATGTTCTCTACCCTCACTTAACTGTCACTGAAACCTTAGTGTTCACAGCACTTTTGAGGTTGCCTAATAGTGTCACAAAAGAAGAGAAAATTGTGCATGCAAAAGCTGTTATAGACCAACTTGGTTTGACAAAGTGCAAGGATAGCATAGTTGGAGGCACATATATAAGAGGGGTTTCTGGTGGAGAAAGAAAAAGGGTTAGTATTGGACAAGAAATGCTTATAAACCCAAGTTTGTTGTTTCTTGATGAACCAACCTCTGGACTTGACTCAACCACAGCACAAAAAATTGTGTCAACTTTGTGGGAAGTTGCAAATGAAGGGAAAACTATTGTGATGACAATACACCAACCTTCTAGTAGATTATACTATATGTTTCATAAAGTGTTGTTGCTATCAGAAGGTAATTCATTGTACTATGGAAAAGGATCTGAAGCTATTCACTATTTTTCTAACATTGGATATGCTCCAGCACTAGCTATGAACCCTGCAGATTTCCTTTTGGATCTTGCAAATGGTGTCTACACCAATGAATTGAAGGAGGATCATGTCATAGATAAACAGCAATTGGTTTTGGCATATAAGAGCAACATTGAAGCATATTTGAAGGCAGGAATTCATGAAATCAGTGACTCTGGTAGCTCTAGTGAAGGTGAATTTAAAGACAGAGGCTTTGGAAAATGGCCAACAAGTTGGTCTCAGCAATTCTTCGTGCTTTTAAGAAGATACCTCAAAGAGAAGAAGCACGAATCGTTCTCGTCCCTCAAGATTGTTCAGATCATTCTAACTGCTCTTCTTGCAGGACTACTTTGGTATAAGTCTGTTCTTTCACACTTGCAGGACCAGATTGGGCTTCTATTTTTTATATGTGGCTTCTGGTCATTTATCCCTCTATATCAAGCAATTTTCACATTCCCTCAAGAGGTAAAGATGCTAGAGAAAGAAAGATCCTCTGGAATGTATAGGCTCTCCTCATATTTCATGTCAAGAATTGTAGCTGAACTTCCAATGGATCTTGTCCTTCCCACCATATTTATTCTCATAATATATTGGTTAGCAGGGTTGAAAGCTAATTTTCTTAGCTTCTTATGCACATTGTTCACCCTCTTACTCCATGTCTTAGTGTCTCAAGGCTTAGGCCTTGCAATTGGTGCTATTGTACTAGACCAAAAATCTGCAACAACTTTTGCATCAGTGCTTATGTTATGTTTCAGTCTTGTTGCTGGGTTTTATGTGCAGCATATGCCAAAATTTATACACTGGATGAAGTACATTTCCAATACCCATTACACATACCAGCTCTTGATTGGGTCTCAGTATTATACTGGTGAGACATACCCTTGTTCTAAAGGGCAGTGTCTAGTTGAAGAATATCCTTCTATAAAGGAAATGGGTTTTCCTAATTTGCATGAGAAAGTAGTGGCTGCAATAGTCCTAGTGATAATGCTAATTGGTTACAGACTTGTAGCTTATTTTTCTCTTATGAGGGTTGGGGTTACAAAGAAATTAACTTAA 1905 0.3732 VDMDQEISDIESQTIYKTTLQEEAPHISHKAKKCHVILKFDDVTYKIKTKKGKLLDKKTMEEEKVILKGVTGIVEPGEILAMLGPSGSGKTTLLTALGGRLGGKLHGTITYNGQPLSNVIKRNSGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEEKIVHAKAVIDQLGLTKCKDSIVGGTYIRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQKIVSTLWEVANEGKTIVMTIHQPSSRLYYMFHKVLLLSEGNSLYYGKGSEAIHYFSNIGYAPALAMNPADFLLDLANGVYTNELKEDHVIDKQQLVLAYKSNIEAYLKAGIHEISDSGSSSEGEFKDRGFGKWPTSWSQQFFVLLRRYLKEKKHESFSSLKIVQIILTALLAGLLWYKSVLSHLQDQIGLLFFICGFWSFIPLYQAIFTFPQEVKMLEKERSSGMYRLSSYFMSRIVAELPMDLVLPTIFILIIYWLAGLKANFLSFLCTLFTLLLHVLVSQGLGLAIGAIVLDQKSATTFASVLMLCFSLVAGFYVQHMPKFIHWMKYISNTHYTYQLLIGSQYYTGETYPCSKGQCLVEEYPSIKEMGFPNLHEKVVAAIVLVIMLIGYRLVAYFSLMRVGVTKKLT 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1405 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 282 IPR027417 -
Lal11g1405 634 SMART AAA_5 76 266 IPR003593 -
Lal11g1405 634 Pfam ABC transporter 67 217 IPR003439 GO:0005524
Lal11g1405 634 Gene3D - 38 283 IPR027417 -
Lal11g1405 634 CDD ABCG_EPDR 35 271 - -
Lal11g1405 634 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 628 - -
Lal11g1405 634 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 289 IPR003439 GO:0005524
Lal11g1405 634 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 28 628 - -
Lal11g1405 634 Pfam ABC-2 type transporter 246 320 IPR043926 GO:0140359
Lal11g1405 634 Pfam ABC-2 type transporter 364 570 IPR013525 GO:0016020|GO:0140359
Lal11g1405 634 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1405 Lal-Chr11 17472589 17475018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1405 74 303 Calmodulin-binding Proteins AT2G36910 27.311 2.13e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1405 K05681 - gmx:100816135 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1405 11 17472589 17475018 Lal11g1405 11 17472589 17475018 ECH