Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1404 ATGGGTGTTCCAGAGAAAGATCTTCTTTCTAAATTGAATTTGCCACCTGGGTTTAGGTTTTACCCAACCGATGAGGAACTTCTGGTTCAGTATCTATATCGCAAAGTAGCTGGTCACTATTTCTCACTGCAAATCATTGCTGAAATCGATTTGTATAAGTATGACCCCTGGATTCTTCCAAGTAAAGCTATATTTGGTGAGAAAGAATGGTATTTTTTCAGCCCAAGAGACAGGAAATACCCGAATGGTTCAAGACCAAATAGAGTAGCTGGTTCTGGCTATTGGAAAGCCACTGGAACTGATAAAACAATCACCACTGAAGGTAGAAAAGTTGGTATTAAAAAATCCCTAGTTTTTTATATTGGAAAAGCTCCCAAAGGCACTAAAACAAACTGGATTATGCATGAGTATAGGCTCCTTCATTCTTCACCAAATAATCCCACTACCAAGGTAGATGAATGGGTTCTATGTCGTATATACAAGAAAAACTCGAGCGTAGAGAAAAGCATAGGAAACGTTTCAACCAACGAATCCTCTTCAAATTCATCTTCCTCCAACATCGATGAAAGTCACTTCCTCATGTCGCAGCAACAGAATTTCACCGTCGTAGACTGGACCAACCCTGCGGTTATGAACTCAGTGACCGAGTTTGTTAACTCGGGGAACCAAACCATGATGAATGACCTTTGTGTCCCTACTCTGATGGAGGAACATGTTCAGAGCAAAACCCAACAACAAGAGTTTTTTAATACTGATTCAGATGGGTTTAGGTATGGTTTGGGTTCAGTCAATGAACCGGGTTTTGGAGTATTTACTTTTTATTGA 825 0.4 MGVPEKDLLSKLNLPPGFRFYPTDEELLVQYLYRKVAGHYFSLQIIAEIDLYKYDPWILPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKTITTEGRKVGIKKSLVFYIGKAPKGTKTNWIMHEYRLLHSSPNNPTTKVDEWVLCRIYKKNSSVEKSIGNVSTNESSSNSSSSNIDESHFLMSQQQNFTVVDWTNPAVMNSVTEFVNSGNQTMMNDLCVPTLMEEHVQSKTQQQEFFNTDSDGFRYGLGSVNEPGFGVFTFY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1404 274 PANTHER NAC TRANSCRIPTION FACTOR 56 1 189 - -
Lal11g1404 274 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Lal11g1404 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 189 - -
Lal11g1404 274 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Lal11g1404 274 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Lal11g1404 274 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1404 Lal-Chr11 17466104 17468497 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1404 1 172 NAC Transcription Factor Family AT3G15500 79.070 2.04e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g1404 NAM 2.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1404 - - gmx:100170718 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1404 11 17466104 17468497 Lal11g1404 11 17466104 17468497 ECH
Lal20g0313 20 2471077 2473227 Lal11g1404 11 17466104 17468497 LSH