Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1402 ATGATGGAGAGTACTGATTCATCCACCGGTTCACAACAACAACAACAACCAAACCTACCACCAGGGTTCCGTTTCCACCCCACAGATGAGGAACTCGTGGTTCACTACCTGAAGAAAAAAACTGCCTCAGTTCCTATTCCAGTTCACATCATCGCTGAGGTTGATCTCTACAAGTTTGATCCATGGGAGCTACCAGCTAAGGCAGTGTTTGGGGATAAGGAATGGTATTTCTTTAGTCCTAGGGACAGAAAGTACCCAAATGGTGCAAGGCCAAATAGGGCTGCAACTTCTGGGTATTGGAAAGCCACAGGAACAGATAAGCCTGTGTTAACCTGTGATGGGACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCACCAAAAGGGATCAAAACCAATTGGATCATGCATGAGTATAGAATTGCTGATAACAAGCCTAATAATAAGCCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTAAGACTTGATGATTGGGTGCTGTGCCGAATCTATAAGAAGAACACTACACATAGGTCTCCTTTGGAACATGACAGAGAAGATTCAATGGATGATATGATTAGAGGGATACCTCTTTCAATCAACTTGGGTCAGATGAATGCTAGGTTCCATCTTTCAAAGATGTTTACAACCTACAATAATAATGCTTTGTTGGAAAATGACCAGAACTTATTAGAAGGAATGGTATTAAATAATGGTTTGGGTTCCTTAGCCTCCAAGTCAGAGCTTCCTTTTGTTCCAAACATTACGAATTCGGCATCGAAAAGAACACTCTCTTCTCTGTATTGGAATGATGATCCAGATATGGAAGTGGCAGGAACATCATCAACAAACAAAAGGTTGAGTTTGGAGAGTGGTGAACATGATAATAATAATGGCACTAATAGCTCTTTTGCAACTCTGCTTAATCAATTCCCTCAAACCCCTTCATTGCACCAACAACAAACAATACTTGGATCATTAGGTGATGGGTTACTTAGAACAACATCATACCAAATAGCAGGAATGAATTGGTATGCTTAG 1062 0.4105 MMESTDSSTGSQQQQQPNLPPGFRFHPTDEELVVHYLKKKTASVPIPVHIIAEVDLYKFDPWELPAKAVFGDKEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTCDGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRIADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKNTTHRSPLEHDREDSMDDMIRGIPLSINLGQMNARFHLSKMFTTYNNNALLENDQNLLEGMVLNNGLGSLASKSELPFVPNITNSASKRTLSSLYWNDDPDMEVAGTSSTNKRLSLESGEHDNNNGTNSSFATLLNQFPQTPSLHQQQTILGSLGDGLLRTTSYQIAGMNWYA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1402 353 MobiDBLite consensus disorder prediction 1 24 - -
Lal11g1402 353 ProSiteProfiles NAC domain profile. 19 180 IPR003441 GO:0003677|GO:0006355
Lal11g1402 353 MobiDBLite consensus disorder prediction 1 21 - -
Lal11g1402 353 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Lal11g1402 353 PANTHER NAC TRANSCRIPTION FACTOR 56 2 326 - -
Lal11g1402 353 SUPERFAMILY NAC domain 11 180 IPR036093 GO:0003677|GO:0006355
Lal11g1402 353 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 326 - -
Lal11g1402 353 Gene3D NAC domain 28 185 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1402 Lal-Chr11 17449764 17451737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1402 2 353 NAC Transcription Factor Family AT3G15510 53.684 3.96e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal11g1402 NAM 8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1402 - - gmx:100784578 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1402 11 17449764 17451737 Lal11g1402 11 17449764 17451737 ECH
Lal20g0312 20 2449250 2451564 Lal11g1402 11 17449764 17451737 LSH