Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1398 ATGGTATTATCGGTGATGATGAAACTTGTGAAGTTGGTTTTTTCTCCCTTTTTGGTTGTCTTTCTGTTTTTGGTTAATGCTTCATTTGCCTTGTACACTCCCCTTGATAATTATCTTATTGCTTGTGGTTCCTCCCAAAACATCACCTTTCAAGGTCACACTTTTGTTCCTGACTCACAACATTCTTCATTAGTGTCCAAAACAGGGAATTCTGTTGTTGTTACTTCCAATTCTAGAGTTGTTCCATTTCCAATCTATCAATCAGCTAGGATTTTCACTGAGAAATCTTCTTATACATTTGAGATTGAGCAAGAAGGGAGGCACTGGGTTAGGTTATATTTTTATCCTGTTCCAAACTCTGGCCATGATTTGAATTCTGCTGCTATAACAGTTGTTACTGATGATTTTGTTCTCTTGAGCAACTTCACCTTTAGGAACTATAAAGGTTCTTATATGTTTAAGGAGTATGCCATCAATGTTACCTCTGAAACATTAACTGTCACCTTTATTCCTTCAATTGGTTCGGTAGCATTTGTCAACGCAATTGAAGTTGTGTCGATGCCAGATGAGCTGTTTTATGATCAGGCATTGGCTCTTCACCCACCAGCCCCATTTAGTGGCCTTTCTGAACTTGCTTTCGAAACCGTTTACCGCTTAAACATAGGTGGTTCCTTTCTTAACGCCGAAAATGACACCCTGGGAAGGACTTGGGACAATGACCTGAAATACCTTCATGTGAACAGCTCAGTCACTAACGTGTCAGTCAGCCCGTCCAACATTAAGTATCCGAAAGGCGTTACGCCTGAGACAGCACCAAATTCGGTCTATGCCACTGCTGAAGCAATGGGGAACGCAAATGTAGCCAATTCTAATTTCAACATTACTTGGGTCTTTCCTGTCGATCGCAACTTCTCCTATTTTATTCGGTTGCACTTTTGTGATATTATGAGCAAGTCCCTCAACACTTTAGTGTTCAATGTATACATAAACAATGACACAGCTCTTGGAAGCCTTGACCTCTCGTCGATAACTAATGACTTGTCCGTGCCTTACTACAAGGACTTTGTTTCAAATGCCTCCGAAGACTCCGACAATTTGACAGTTAGTGTTGGTCCTGATACAATGGCAGACATTACAAATGCCACCATGAATGGACTGGAGATAATGAAGATCAGCAATGCATTGAAGAGCTTTGATGGGTTTTCTTCAGTTGAAAGTTTCCTTCCTAGTTCATCATCAAAGAAGAAGAAGATAGGAATAATAGTTGGCTGTGTTGTTGGGGCTGTAGCTGCTATAGCATTTGTTGGTTTGTGTTTTGGCTGCTTGGTGCGACGCAATTCAAAGACTACTCAACAAGGTCGTCCGTTGCTGTCTTTACCGTTATATGGAAACTCTCAGACTATGACAAAGATGTCAACAATTTCACAGAAGAGTGGAACTGCAAGCTGCATTTCTTTATCTTCAATAAATCTTGGAAAGGTCTTCACTTTCCAAGAAATCCTAGATGCAAGCAACAAATTTGATGAGAGGCTGCTTCTAGGTGTTGGCGGTTTTGGCAGGGTTTATAAGGGAACACTTGAAGATGGGACTAATGTAGCTGTTAAAAGGGGGAACCCCAGATCAGAACAAGGTATTGCTGAATTCAGAACAGAAATTGAAATGTTATCCAAGCTTCGACATCGCCATCTTGTGTCTCTCATTGGTTATTGCGATGAGAGGTCAGAAATGATTCTTGTCTATGAATGCATGGCTAATGGACCCCTCAGGAGTCATTTGTATGGAACAGATCTGCCGCCTCTATCATGGAAGCAACGGCTCGAAATTTGCATTGGAGCAGCTAGAGGCCTTCATTATCTCCACACCGGTGCATCTCAAAGCATCATTCACCGTGATGTTAAGACAACAAACATCCTCTTAGATGATAACTTTGTTGCTAAAGTTGCTGATTTCGGCCTCTCCAAAACTGGTCCTGCTCTCGATCAGACTCATGTTAGCACTGCCGTTAAAGGTAGTTTCGGCTATCTTGATCCTGAATACTTTAGAAGGCAACAGCTTACAGAGAAGTCAGATGTGTATTCATTTGGAGTAGTTTTAATGGAAGTATTATGCACAAGACCGGCCTTGAATCCTGTCCTTCCTCGGGATCAAGTTAACATAGCCGAGTGGGCAATGAGCTGGCAGAAAAAAGGCATGCTTGATCAAATCATGGATCAAAAACTGACAGGGAATGTGAATCCTGCTTCTCTTAAGAAGTTTGGCGAAACAGCCGAGAAGTGTTTGGCCGAATATGGCGTGGATAGGCCTTCTATGGGAGATGTCTTGTGGAATCTTGAATATGCTTTGCAGCTCCAAGAGACTGCCTCATCAGCACTAATGGAACCTGAAGATAACAGCACAAACCACATCACAGGAATTCAGTTAACAACTCTTCAGAATTTCGATAACAGCATTAGTATGATTGGTGGCGAAAATTCGGCCACCGATGATGATGCAGAAGATGCTAACACAAGTGCAGTGTTCTCACAGTTGGTGAATCCTCATGGAAGATAA 2550 0.4184 MVLSVMMKLVKLVFSPFLVVFLFLVNASFALYTPLDNYLIACGSSQNITFQGHTFVPDSQHSSLVSKTGNSVVVTSNSRVVPFPIYQSARIFTEKSSYTFEIEQEGRHWVRLYFYPVPNSGHDLNSAAITVVTDDFVLLSNFTFRNYKGSYMFKEYAINVTSETLTVTFIPSIGSVAFVNAIEVVSMPDELFYDQALALHPPAPFSGLSELAFETVYRLNIGGSFLNAENDTLGRTWDNDLKYLHVNSSVTNVSVSPSNIKYPKGVTPETAPNSVYATAEAMGNANVANSNFNITWVFPVDRNFSYFIRLHFCDIMSKSLNTLVFNVYINNDTALGSLDLSSITNDLSVPYYKDFVSNASEDSDNLTVSVGPDTMADITNATMNGLEIMKISNALKSFDGFSSVESFLPSSSSKKKKIGIIVGCVVGAVAAIAFVGLCFGCLVRRNSKTTQQGRPLLSLPLYGNSQTMTKMSTISQKSGTASCISLSSINLGKVFTFQEILDASNKFDERLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYECMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMSWQKKGMLDQIMDQKLTGNVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETASSALMEPEDNSTNHITGIQLTTLQNFDNSISMIGGENSATDDDAEDANTSAVFSQLVNPHGR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1398 849 Gene3D Transferase(Phosphotransferase) domain 1 583 802 - -
Lal11g1398 849 PANTHER OS07G0166700 PROTEIN 24 842 IPR045272 GO:0004714|GO:0006468
Lal11g1398 849 Gene3D - 211 393 - -
Lal11g1398 849 Gene3D - 37 188 - -
Lal11g1398 849 SUPERFAMILY Protein kinase-like (PK-like) 485 778 IPR011009 -
Lal11g1398 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Lal11g1398 849 CDD STKc_IRAK 513 778 - -
Lal11g1398 849 SMART serkin_6 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1398 849 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Lal11g1398 849 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 24 842 - -
Lal11g1398 849 Gene3D Phosphorylase Kinase; domain 1 465 581 - -
Lal11g1398 849 Pfam Malectin-like domain 40 391 IPR024788 -
Lal11g1398 849 Pfam Protein tyrosine and serine/threonine kinase 513 773 IPR001245 GO:0004672|GO:0006468
Lal11g1398 849 ProSiteProfiles Protein kinase domain profile. 507 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1398 Lal-Chr11 17429711 17432726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1398 30 799 Receptor kinase-like Gene Family AT2G21480 53.640 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal11g1398 Malectin_like 5.4e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1398 - - lang:109334411 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1398 11 17429711 17432726 Lal11g1398 11 17429711 17432726 ECH
Lal20g0308 20 2357232 2359760 Lal11g1398 11 17429711 17432726 LSH
Lal11g1398 11 17429711 17432726 Lal1g1652 1 18940947 18943496 LSH