Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1394 ATGATGTTAACAGCTACAAGGAGCTCTCTAGAAGAGATGCTTGATTCACTCCGCCGGAGAGATGAAGAAGAGAAGCCTAAGGACTTGCCTCCGGCATTGCCAGCTCGTCCGGCATCAAAAGCCCGGCTTCCTCCGGCGAGAAGGACATTGCCTAATAGCTTCAAGGTTGGTAATGAGAATGGTAGGGGGCACAAAAGGAAAGGTAGTTTTGGGAACAAGAAGATGAAGATGGATGTTGAATCACCATATATTGTCAAATCAGAAGATAAAATTAAGAGTGAACTCGGTGAAGAATCACCACAAGGTCCACTTTTAACATCTGCTGATACTACTGCTTCTGCAGCTCCTCCACCAGGGGAATTAGAAGATGATAATGTTGCTTATTTCATCAAAAAGAAACTTAATGTTTGGTGTCGGCAAACAAAAGGGAAGTGGGGACTAGGAAGAATACAGTCAACTTCAGGAGAAGCAGCATCTGTCTCATTCTCAAATGGAAATGTTATGAAAGTGTCCAGATTAGAGATCCTACCAGCTAATCCTGATATACTAGAGGGCGTGGATGATCTTATACAGCTCAGTTATTTAAATGAGCCCTCCGTTCTACACAATCTTCAGTTTAGATATTCTCAAGATATGATTTATAGTAAATCAGGGCCAGTTTTAATTGCTCTCAATCCCTTCAAAGATGTCCACATTTACGGAAATGATTATGTTGCAGCTTATAGGCAGAAACTTATGGATAGTCCTCATGTTTATGCTATGGCAGACACAGCTTATAATGAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGCGAGAGTGGATCTGGTAAGACAGAGACAGCGAAAGTTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGTATAGAAAATGAAGTTCTTCAGACAAGTTTTATATTAGAAGCTTTCGGAAACGCAAAAACATCCAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACATTGGGGAAAATTTGTGGGGCTAAAATTCAAACCTGTAAGTATCGTCAATCAAGAGTTGTTCAACTGGTCAATGGGGAGCGATCTTATCACATATTTTATCAACTATGTGCTGGGTCTTCACCCGATCTTAAAGAGAGGTTGAATCTTAGAGTGGCCAGCGGATATAAATATCTTAACCATAGTGACTGCATGGCAATTGACGGTGTTGATGATGCTAAAAATTTTCACAGGCTGATGAAAGCGTTGGATGTTGTTCGAATGAGCAAAGAGGATCAAGAGCTGGTCTTTAAGATGCTTGCTGCAATATTATGGTTGGGAAATATATCATTCAATGTTACTGACAATGAAAATCACATTGAAGTGGTGGAGGATGAAGCTGTAACCACTGCTGCCTTGCTGATGGGTTGCAGTTCCGAGGAGTTAATGACAGCATTATCCACCCGTAAAATCCAAGCTGGCAAGGATACTATTGCCAAAACATTGACATTGCGGCAGGCCATTGATACAAGAGATGCATTAGCAAAATTTATCTATGCAAACTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACGACGTACTGGGAGATCCATTAGTATTCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAATTTTGTATAAATTATGCCAATGAGAGGCTTCAACAGCATTTCAACCGGCATCTGTTTAAACTTGAGCAGGAGGACTACGAATTAGATGGCATTGATTGGACGAAAGTAGATTTTGATGACAACCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGTTGGACGAGGAATCAAATTTTCCCAGGGCCACTGATCTAACACTTGCCAGCAAACTTAAGCAGCACCTGAATGCTAATCCTTGCTTTAAAGGGGAAATGGGAAGGGCTTTCAGTGTTCGGCATTATGCCGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATCCACTTCCTTCTGATTCCATTCAACTGCTGTCCTCATGCACTTGTGAACTGCTGCAGTTGTTCTCCAAAACGCTTAACCGGTATCAGAAGCAATCGTATTCCGTCCATGCAGGAGCTCCGGACTCACAAAAGCAGAGTGTTGGCACTAAGTTCAAGGGTCAATTGTTTAAGTTGATGCATCAGTTGGAGAGCACGACGCCACACTTCATTCGTTGTATAAAGCCAAATACTAAGCAACATCCTGGCATATTTGATGAAGACCTTGTTCTTCAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGAATGACACATCAAGAGTTTGCCAGAAGGTATGGGTTTCTTCTTTCTGAGGTAAACACATCTCAGGACCCATTGAGCATCTCAGTTTCTGTTTTGCAACAATTTAATATTCCTCCTGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGAACCGGGCAGATTGGTGCACTGGAAGACAAAAGAAAACAGATTTTGCACGGAACTGTTGGGATTCAAAAATGCTTTCGTGGCCAAAAGGCTCGCAGTTGTTACCATGAACTTAAGAATGGAGTAGCAACTATACAATCATTTGTTCGGGGAGAAATCGAGAGAAGGAAATATGGTGTTATGGTGAAGTCTTCCATGACTATTTCTTCTGAAAAGATTGAGGAGATTCAGGCAGTCATAGTACTACAATCTGTTGTTCGTGGGTGGCTGGTTCGAAGGCATATTAGAGGCACAGATAAGTTTAAGATATATCCCGAAAATGCAAGACCTAGGCGTAAGTCACATACGAAGATGCCAGAAGTGAAGAATATGTCGCAGAACGTGCCTTCTGCTTTAGAAGAACTCCAAAAGCGAGTTATCAAGGCTGAAGCAACCATTGAGCAAAAGGATGAGGAAAATGCTAAATTGAAGGAACAACTAACACAATTTGAGAGAAGATGGATTGAATATGAGACAAAGATGAAATCAATGGAAGAAATGTGGCAAAAACAGATGGCGTCTTTGCAAATGAGCCTTGCTTCTGCTAGAAAGAGCCTTGCTTCTGAGAATGGCTCTAGTCAGCCTGTACGGTATGATGTTGCATCGCCTCTTTGCTATGATTCCGAAGATAATACTTCCATAGGATCCCAAACACCCGGCCCTCGAACACCAGGCCTGAGCACGCCTATGAAGTATTCTAGTAGTTTTTCAGTTGGAGTAGGCAGGGGGACTAATGGTACTTCCATCGGATCCCAAACACCCGGCCCGAGCACGCCTATGAAGTATTCTAGTAGTCTTTCAGTTGGAGCAGGGAGGGGGGCTAATGGTACTTTGAATTCTTCGGTAAGCACTCTGATGAAGGAATTTGATCACCGCAGGCATACATTTGATGATGATGCCAGAACACTGCTGGAGGTTAGACCATCACAATCTGGTAACACGAATTCCATTGAAGAATATCGGAAACTTAAACATAGGTTTGAGGCATGGAAGAAAGAATACAAGGTTAGATTAAGGGAGACAAAAGCGAGACTTCATAAATCAGGGAACTCGGAAGTGGAAAAAAGTCGGCGGACATGGTGGGGAAAATTAAGTTCAATAGCTCTCTAG 3672 0.4202 MMLTATRSSLEEMLDSLRRRDEEEKPKDLPPALPARPASKARLPPARRTLPNSFKVGNENGRGHKRKGSFGNKKMKMDVESPYIVKSEDKIKSELGEESPQGPLLTSADTTASAAPPPGELEDDNVAYFIKKKLNVWCRQTKGKWGLGRIQSTSGEAASVSFSNGNVMKVSRLEILPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYSKSGPVLIALNPFKDVHIYGNDYVAAYRQKLMDSPHVYAMADTAYNEMIRDEVNQSIIISGESGSGKTETAKVAMQYLAALGGGSCGIENEVLQTSFILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGKICGAKIQTCKYRQSRVVQLVNGERSYHIFYQLCAGSSPDLKERLNLRVASGYKYLNHSDCMAIDGVDDAKNFHRLMKALDVVRMSKEDQELVFKMLAAILWLGNISFNVTDNENHIEVVEDEAVTTAALLMGCSSEELMTALSTRKIQAGKDTIAKTLTLRQAIDTRDALAKFIYANLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFDDNQECLDLFEKKPLGLLSLLDEESNFPRATDLTLASKLKQHLNANPCFKGEMGRAFSVRHYAGEVLYDTNGFLEKNRDPLPSDSIQLLSSCTCELLQLFSKTLNRYQKQSYSVHAGAPDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQHPGIFDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYGFLLSEVNTSQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRTGQIGALEDKRKQILHGTVGIQKCFRGQKARSCYHELKNGVATIQSFVRGEIERRKYGVMVKSSMTISSEKIEEIQAVIVLQSVVRGWLVRRHIRGTDKFKIYPENARPRRKSHTKMPEVKNMSQNVPSALEELQKRVIKAEATIEQKDEENAKLKEQLTQFERRWIEYETKMKSMEEMWQKQMASLQMSLASARKSLASENGSSQPVRYDVASPLCYDSEDNTSIGSQTPGPRTPGLSTPMKYSSSFSVGVGRGTNGTSIGSQTPGPSTPMKYSSSLSVGAGRGANGTLNSSVSTLMKEFDHRRHTFDDDARTLLEVRPSQSGNTNSIEEYRKLKHRFEAWKKEYKVRLRETKARLHKSGNSEVEKSRRTWWGKLSSIAL 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1394 1223 ProSiteProfiles IQ motif profile. 858 885 IPR000048 GO:0005515
Lal11g1394 1223 PANTHER MYOSIN-2 ISOFORM X1 118 1219 - -
Lal11g1394 1223 Coils Coil 973 1014 - -
Lal11g1394 1223 Pfam Myosin head (motor domain) 186 842 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Lal11g1394 1223 Gene3D - 910 1032 - -
Lal11g1394 1223 MobiDBLite consensus disorder prediction 1063 1129 - -
Lal11g1394 1223 Gene3D - 367 423 - -
Lal11g1394 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 904 IPR027417 -
Lal11g1394 1223 PANTHER MYOSIN 118 1219 - -
Lal11g1394 1223 MobiDBLite consensus disorder prediction 94 120 - -
Lal11g1394 1223 Gene3D Kinesin motor domain 183 787 IPR036961 -
Lal11g1394 1223 SMART MYSc_2a 178 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 PRINTS Myosin heavy chain signature 214 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 PRINTS Myosin heavy chain signature 268 293 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 PRINTS Myosin heavy chain signature 311 338 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 PRINTS Myosin heavy chain signature 543 571 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 PRINTS Myosin heavy chain signature 596 624 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 Pfam IQ calmodulin-binding motif 918 937 IPR000048 GO:0005515
Lal11g1394 1223 Gene3D Myosin VI head, motor domain, U50 subdomain 424 532 - -
Lal11g1394 1223 Gene3D - 555 744 - -
Lal11g1394 1223 Gene3D - 859 909 - -
Lal11g1394 1223 CDD MYSc_Myo8 198 842 IPR036022 -
Lal11g1394 1223 ProSiteProfiles IQ motif profile. 916 943 IPR000048 GO:0005515
Lal11g1394 1223 SMART iq_5 915 937 IPR000048 GO:0005515
Lal11g1394 1223 SMART iq_5 878 900 IPR000048 GO:0005515
Lal11g1394 1223 SMART iq_5 855 877 IPR000048 GO:0005515
Lal11g1394 1223 MobiDBLite consensus disorder prediction 1 73 - -
Lal11g1394 1223 ProSiteProfiles Myosin motor domain profile. 184 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1394 1223 Gene3D - 788 855 - -
Lal11g1394 1223 MobiDBLite consensus disorder prediction 12 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1394 Lal-Chr11 17385235 17395152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1394 1 1217 Myosins gene family AT5G54280 59.968 0.0 1504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1394 K10357 - gmx:100819335 1907.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1394 11 17385235 17395152 Lal11g1394 11 17385235 17395152 ECH