Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1391 ATGGAAAGCTTCAAGGTACAAGTTTTGTGCAGCTTTTTGTTCTACTTCACACATAGCATAAACACACTACACACAATTGGTCCAGGACAATCTATAAAGGGTGATGAGACTCTAGTTTCACCAGCAGAAACTTTTGAAGCTGGTTTCTTAAGCTTTAGAGAGCAATACTTTGGAATATGGTATAAGGGTATTTCTCCAAGAACAGTTGTATGGATAGCAAATAGGGATACACCACTTGGAAACTCTTCAGGAGTTTTGAATGTTACTGATGTAGGAAACCTTGTTATTCTTGATGGCAAAGGTGTTGCAGTATGGTCCTCCAATACATCAATAATTGTAAAAAAACCAATTTTGAAGCTATTGGACAATGGAAATCTTGTTGTGGTGGAAGAAAACAACCCAAAGAAGTTTCTTTGGCAAAGTTTTGATCTTTTTGGTGATACTTTGCTACCAGGGATGAAACTTAGAAGTAACTTAGTAAGTGGTGATTATAAATCATTGATATCATGGAGAGATACACAAGATCCTTCTACTGGTTTGTATTCATACCATATAGATACTAAAGGTCTTCCTCAAGTAGTTATCACAAAGGGAGGGGTGTTATTGTTTAGGCCAGGTTCATGGAATGGAAATATTTTATCTGGGATTTCATCTAAAAGTTTGTACAAATCTTTTAATTTTTCATTTGAGTTAACAGATAAGGAAGTTTCTTATGGTTATGAACTCTTGAATCAATCAATTATCTCAAGGTACATGCTCACTCCGACCGGCCTAGTGGAGCGCTTCATATTCCCGGATCACTTTAAGGGTTGGGAGCTTTTCCTAGCTGGCCCTGCAGACCAGTGTGATAATTATGCAATTTGTGGTGCAAATGCTAACTGTGATGTTATCAACTCTCCAATATGTGAATGTCTTAAGGGTTTCATTCCAAAATCTCAAGCAAAATGGAACTCGCAAATTTGGTCGGATGGTTGTGTAAGGAGAGTTGATTTAGCCTGTGGCAAGAGTGATGGCTTTCTGAAGTTTACAGGATTGAAGTTGCCGGATACGTCAACTTCTTGGTTTAATAACAGCTTGAACCTAATTGAATGTCAGAAATTATGTCTCAAAAACTGTTCTTGTGCAGCATATGCAAATTTAGATGTGAGAAATGGTGGAAGTGGCTGTTTGCTTTGGTTTAATAACCTGGTGGACATGAGAAAACTTACTTCTGGAGGACAAGACTTTTACATTAGAGTTGCAGCTTCAGAATTAGATCATAGTAACGGCTCGAAAAAGAAGCTTGCAGGAATTCTGGTAGGATGTGCTATGTTTATTCTCATTTTGATAGTACTTGGAGTAATCATACTCCGGAGGAAGAAACTCAAGAAGGAAGGGAAGAACGAAATAATAAACTGGAAGAATCACACTGATAACAAAGATAAGGAAGGCATTGACATACCAATATTTGATTTATCAACCATAGCTAATGCAACTAGTAATTTCTCAATCAGCAACAAATTAGGAGAAGGTGGATTTGGACCAGTTTACAAGGGAACACTGAAAAATGGGAAAGAAATAGCGGTAAAGCGACTCGCCGATAATTCAGGACAAGGTCCCAAAGAGTTCATAAACGAAGTTGAGCTAATTGTGAATCTTCAGCACAGAAATCTTGTGAAACTTCTTGGCTGTTGCATTCATGATGATGAGAGACTATTGATATATGAATTCATGATCAACAGAAGCTTGGACTACTTTATCTTTGATGAAAATAGAAGAAGTTTACTGCATTGGCCTCGGCGCTTCCAAATTATTTGTGGGATAGCTCGAGGACTTCTATATCTTCATGAAGACTCAAGATTAAGGATTATCCATAGAGATCTCAAGACCAGCAACATTCTTCTTGATGAAAATATGAATCCAAAAATATCAGACTTTGGTATAGCTAGGATATTCGTGGAAAATGAATCCGAAGGCAAAACAAAGAGAATAGTAGGAACTCATGGCTATATTTCTCCGGAGTATGCAACCCGTGGGTTTTTCTCAGTAAAGTCTGATGTCTTCAGTTTTGGTGTAATTGTACTAGAAATAGTTAGTGGAAGGAAGAATAGGGACTTTTTGCACCATACTGATCTTGACCTTCTTGGGCATGCATGGAGACTATGGGGTGAAGAGAGGCCATTGGAGGTGCTAGATGAATCAATAGGGGATACAATTACAGTATCTGAAGTTGTGAGATGTATAAACATGGGTCTTTTATGTGTACAAGAGAGACCAGATGATAGGCCAGACATGTCAGCTGCAGTTTTAATGCTGAATGGTGAGAAACCATTGTCTAGGCCTAAGGAACCTGCTTTTTATCCACACCAATTTGTCTCTTCATCAAGAAATTGTGAACTTCCATCAACTAATGAAATGACTATTACACTGTTAGATGCAAGGTAG 2424 0.3791 MESFKVQVLCSFLFYFTHSINTLHTIGPGQSIKGDETLVSPAETFEAGFLSFREQYFGIWYKGISPRTVVWIANRDTPLGNSSGVLNVTDVGNLVILDGKGVAVWSSNTSIIVKKPILKLLDNGNLVVVEENNPKKFLWQSFDLFGDTLLPGMKLRSNLVSGDYKSLISWRDTQDPSTGLYSYHIDTKGLPQVVITKGGVLLFRPGSWNGNILSGISSKSLYKSFNFSFELTDKEVSYGYELLNQSIISRYMLTPTGLVERFIFPDHFKGWELFLAGPADQCDNYAICGANANCDVINSPICECLKGFIPKSQAKWNSQIWSDGCVRRVDLACGKSDGFLKFTGLKLPDTSTSWFNNSLNLIECQKLCLKNCSCAAYANLDVRNGGSGCLLWFNNLVDMRKLTSGGQDFYIRVAASELDHSNGSKKKLAGILVGCAMFILILIVLGVIILRRKKLKKEGKNEIINWKNHTDNKDKEGIDIPIFDLSTIANATSNFSISNKLGEGGFGPVYKGTLKNGKEIAVKRLADNSGQGPKEFINEVELIVNLQHRNLVKLLGCCIHDDERLLIYEFMINRSLDYFIFDENRRSLLHWPRRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGIARIFVENESEGKTKRIVGTHGYISPEYATRGFFSVKSDVFSFGVIVLEIVSGRKNRDFLHHTDLDLLGHAWRLWGEERPLEVLDESIGDTITVSEVVRCINMGLLCVQERPDDRPDMSAAVLMLNGEKPLSRPKEPAFYPHQFVSSSRNCELPSTNEMTITLLDAR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1391 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Lal11g1391 807 CDD PAN_AP_plant 329 414 - -
Lal11g1391 807 Pfam PAN-like domain 333 399 IPR003609 -
Lal11g1391 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Lal11g1391 807 SMART serkin_6 495 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1391 807 Gene3D Phosphorylase Kinase; domain 1 468 570 - -
Lal11g1391 807 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Lal11g1391 807 Gene3D - 18 142 IPR036426 -
Lal11g1391 807 SMART blect_4 29 145 IPR001480 -
Lal11g1391 807 Gene3D Hepatocyte Growth Factor 330 411 - -
Lal11g1391 807 CDD B_lectin 30 143 IPR001480 -
Lal11g1391 807 Pfam S-locus glycoprotein domain 203 312 IPR000858 GO:0048544
Lal11g1391 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 176 IPR036426 -
Lal11g1391 807 SUPERFAMILY Protein kinase-like (PK-like) 479 784 IPR011009 -
Lal11g1391 807 ProSiteProfiles Protein kinase domain profile. 495 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1391 807 Pfam Protein tyrosine and serine/threonine kinase 497 696 IPR001245 GO:0004672|GO:0006468
Lal11g1391 807 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 13 807 - -
Lal11g1391 807 Pfam D-mannose binding lectin 68 171 IPR001480 -
Lal11g1391 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 807 - -
Lal11g1391 807 SMART ntp_6 334 413 IPR003609 -
Lal11g1391 807 Gene3D Transferase(Phosphotransferase) domain 1 571 775 - -
Lal11g1391 807 CDD STKc_IRAK 501 767 - -
Lal11g1391 807 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1391 Lal-Chr11 17364614 17369372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1391 422 782 Receptor kinase-like Gene Family AT4G23190 51.622 9.55e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal11g1391 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1391 - - ccaj:109805721 1221.07