Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1381 ATGGGGATGGCTGCATCAGAGTCACAACAGTATCATGTGTTGGCTGTTGATGACAGCATCATAGATAGAAAGCTTATTGAGAGGCTGCTCAAAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTAGGCTTACAAAAGAATGATGAAACCAACCCAATTAGACCTTGTGTTTCTCCAAAAATCCATCAGGATATGGAGGTGAATCTAGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAAAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCCTCTGAGAATGTACCTTCAAGGATTACCAGATGTTTGGAGGAAGGGGCTGATGAATTTTTCTTGAAGCCTGTGAGGAAATCAGATTTGAATAGGCTTGAACCCCATATTAAGAGAACCAAATTGAAAGATCAAAAGCAAGAAACATTAGAAAAGGTTGAAAACTTAGAACAACAACAACAAATCCAAAATGATCAACCACAACAACAAATTCTACAACCAGAGTCAGAGACCAATATAGAACAACAACAAAAACAACAACAACAACAACAATCACTACAACAAGGGAAGAGTAACAAAAGGAAGACCATGGAACAAGGGCTTACACCTGAGACTGACAGAACAAGACAAAGATACAACAGTGGCATAGCCACTGTGGTATGA 714 0.3852 MGMAASESQQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLQKNDETNPIRPCVSPKIHQDMEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGADEFFLKPVRKSDLNRLEPHIKRTKLKDQKQETLEKVENLEQQQQIQNDQPQQQILQPESETNIEQQQKQQQQQQSLQQGKSNKRKTMEQGLTPETDRTRQRYNSGIATVV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1381 237 Coils Coil 149 176 - -
Lal11g1381 237 Gene3D - 10 230 - -
Lal11g1381 237 MobiDBLite consensus disorder prediction 223 237 - -
Lal11g1381 237 ProSiteProfiles Response regulatory domain profile. 12 148 IPR001789 GO:0000160
Lal11g1381 237 SMART REC_2 11 144 IPR001789 GO:0000160
Lal11g1381 237 SUPERFAMILY CheY-like 10 183 IPR011006 -
Lal11g1381 237 MobiDBLite consensus disorder prediction 165 237 - -
Lal11g1381 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 230 - -
Lal11g1381 237 CDD REC_typeA_ARR 13 143 - -
Lal11g1381 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 230 IPR045279 GO:0009736
Lal11g1381 237 MobiDBLite consensus disorder prediction 165 213 - -
Lal11g1381 237 Pfam Response regulator receiver domain 13 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1381 Lal-Chr11 17331829 17333925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1381 1 237 Response Regulator Gene Family AT3G57040 58.468 1.42e-89 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal11g1381 Response_reg 2.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1381 K14492 - gmx:100788079 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1381 11 17331829 17333925 Lal11g1381 11 17331829 17333925 ECH
Lal11g1381 11 17331829 17333925 Lal1g1670 1 19138744 19140882 LSH