Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1365 ATGGCAATCTGGAAGTGCTTATTTGGATGGGTGAAAAAGCTATTATTCACTTCTGAATCAAAGGGAAAAAAGCCAAAGAAATGGAGTGATGGAAGGTCTAAGTTGAAAAAGTATAGTGCTACAGATAGAAGAACATTAATAGAAGCAAAAGCTGAGCAAAGAAAACATGCTTTGACTATGGCTATTGCAACAGCATCTGCTGCAGAAGCTGCTGTTGCAGCTGCCAATGCTGCTGCTGAGGTTGTCCGGTTAACAACTGCTTCTTGTTCTTATTCATATCGATCCAATGGCGACAAGAACTCGGCTGCAATCAAGATTCAAACCGCGTATCGTGCACATCTGGCTAGAAAAGCATTAAGAGCACTGAAGGGTGTTGTTAGATTGCAAGCTATAGTTCGCGGCCAATCTGCGAGACGCGAATTGTCCCGAACTTTGAAGAAATTGCTCTCCAATGCAAGGAAACAGGTAGAAGTTCAGGAAAGAAGCAATCATAGCGAAGAAGAACGCTACGAACATGACAAGTTCAAGCAGTTTGCAAATCGAAAGAAGAGTTCAGAAGAAGAGAAGGAAATTAAAAATGAATTTTGTAGTCAAAGAACATGGAATTGCAGCATGCACTCAAGAGAAGATTTTGAAGACACATGGTTAAGAAAACAAGAGGCCATTGTCAAAAGAGAACGCATGAAGCAGTACTCTTATTCACACAGGGAGATAACAATTCCTGAAATTGGAAGAGAGAGCAGCCATATTGTAAATCTAGGACAATTGGTGCATAAAGAGAGAGCACCTCTTCCTTCAAAGGGATGGCATAATACAACACAAGTTGCACATAGGAACCTGAAAAAACAAGATTCACAAGAAGGACTAAGTTCACAAATTTCAACCCAAAGGAAAACATTTTATCATGGAAAGAAAAAATGTGTAATAGATGATAATTTCATGGCAAATTCTCCAGTTTTCCCAAGTTACATGGCTGTGACAGAATCCACTAAAGCAAAGGTAAGGTCATTGAGCTCACCAAGGCAAAGAAAAAGATATTTTGATGAATGCTCCAATCATAGTGTTCCTCAGAATAAGGGAATACCCTTCTGGTCTTCTTATTATGGCACCAATAATGAAAACACTGAAACTTCTCTCAACATAGATGCCAGGGTGCAAATTGGCATCAATATAATTCCTTAA 1182 0.3934 MAIWKCLFGWVKKLLFTSESKGKKPKKWSDGRSKLKKYSATDRRTLIEAKAEQRKHALTMAIATASAAEAAVAAANAAAEVVRLTTASCSYSYRSNGDKNSAAIKIQTAYRAHLARKALRALKGVVRLQAIVRGQSARRELSRTLKKLLSNARKQVEVQERSNHSEEERYEHDKFKQFANRKKSSEEEKEIKNEFCSQRTWNCSMHSREDFEDTWLRKQEAIVKRERMKQYSYSHREITIPEIGRESSHIVNLGQLVHKERAPLPSKGWHNTTQVAHRNLKKQDSQEGLSSQISTQRKTFYHGKKKCVIDDNFMANSPVFPSYMAVTESTKAKVRSLSSPRQRKRYFDECSNHSVPQNKGIPFWSSYYGTNNENTETSLNIDARVQIGINIIP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1365 393 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Lal11g1365 393 Gene3D - 96 148 - -
Lal11g1365 393 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Lal11g1365 393 PANTHER IQ-DOMAIN 12 1 378 - -
Lal11g1365 393 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Lal11g1365 393 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Lal11g1365 393 Pfam Protein of unknown function (DUF4005) 313 361 IPR025064 -
Lal11g1365 393 Coils Coil 149 169 - -
Lal11g1365 393 PANTHER IQ-DOMAIN 5-RELATED 1 378 - -
Lal11g1365 393 SMART iq_5 121 142 IPR000048 GO:0005515
Lal11g1365 393 SMART iq_5 98 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1365 Lal-Chr11 17186427 17188923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1365 1 373 IQD Protein Family AT5G03960 39.750 6.61e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1365 - - lang:109347509 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1365 11 17186427 17188923 Lal11g1365 11 17186427 17188923 ECH