Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1360 ATGGCTTCAAAATCAAACACTGTGGAAGAAGAAGAAGAAGAATTAACACTACCAACGGACGAATATGAAGCTTTGATTTCAACCACCGACGTTGAACTGCTTAAGAGAGCTTGGCGTAATGAGAAGTCAGCCCCTGAGATTCTTCGATTTGAATCCGATTTGATTAACCGTGTCACGGAACAGATTCAATTGATGGAAGAAACTGTGGAGGAGAATTCTACTGATGATGCTGACCCTCTTTCGTTATCTCTATACCAAATGGATTTGGATAGAACTTTGTTTTTATTAAGATCATATCTTCGGGTCCGCATCCAGAAGATTGAAAAGTACATGTTCCACATTCGGAAAACCGAAGAACTCTGGAACAGGCTATCTAAAGAAGAAAAAAAATTCACTAGAGGGAAAGACTACCTTTTACAGTGTACGGATGACCTAAAGAAACATGTGGAGGAGAATGTTCTTTCCCGATTGCCCGAAAATTATCAATCTGTTCTGAAGCAATCTGTTATAAGTGAAGAGGATGACATGGTCCCAGAACCACTACTAGACACATTTGTTTTATGTAGAAGTAAAGAGTCGAAGCTTTTTGAAATGGAGCCTGGTGTCCTCTACTTCATATGTTACAAATCGATAAAGGCACTCGTAGAGAGTGGCAAAATCGATCTGCTGTGA 672 0.3973 MASKSNTVEEEEEELTLPTDEYEALISTTDVELLKRAWRNEKSAPEILRFESDLINRVTEQIQLMEETVEENSTDDADPLSLSLYQMDLDRTLFLLRSYLRVRIQKIEKYMFHIRKTEELWNRLSKEEKKFTRGKDYLLQCTDDLKKHVEENVLSRLPENYQSVLKQSVISEEDDMVPEPLLDTFVLCRSKESKLFEMEPGVLYFICYKSIKALVESGKIDLL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1360 223 PIRSF GINS_Sld5 1 223 IPR008591 GO:0006261
Lal11g1360 223 PANTHER SLD5 PROTEIN 14 223 IPR008591 GO:0006261
Lal11g1360 223 Pfam DNA replication complex GINS protein SLD5 C-terminus 192 223 IPR031633 -
Lal11g1360 223 Gene3D - 18 213 - -
Lal11g1360 223 SUPERFAMILY GINS helical bundle-like 27 165 IPR036224 -
Lal11g1360 223 SUPERFAMILY PriA/YqbF domain 182 223 - -
Lal11g1360 223 Pfam GINS complex protein 55 129 IPR021151 -
Lal11g1360 223 CDD GINS_A_Sld5 30 154 IPR038749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1360 Lal-Chr11 17153138 17156696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1360 21 176 Core DNA Replication Machinery Family AT5G49010 63.462 1.08e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1360 K10735 - gmx:100784291 297.36