Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1353 ATGGGTGACAAAGATTCCAATACTCCATTAGATGTTGATTATAGTGTATGTGAGGAAAATTTGACCTCTCATTCTCCAGAGGAATGTAAGCTTGAAATCCATAATCTGAATGATAATGATGTTTTTCCTGCACCACAAGTTGGGATGGTATTTAGTTCAGAGGATGAGGTGAGGTTGTACTATGCAAAATTCGCTAATCGGCAAGGTTTCCGCTTCAAGACTAGAACGTCAAAAAAGGGAGATGATGGGAGAATTAACTATTTCATACTTGCATGTTCCAGAGTAGGGATTAGTAGAGGGAATAGAGGAATGAGAAATACTTCAGATTCATCAAGGAAAGAGAATTGTAAAGCCAAGATCACTGTGACTTTATGCGAAGATGGTACCTTCCGGATTCTCACAGTTGTGCTCAGTCACAACCATGAATTGCTTTTGCATCAAACCTTAAAAGATATTCACATACGTCGTAGAAGGACATCAGATCTGAAAGATACTGAAGTGAGTGTTAAAAGGACATCAGAGCTTAATGATTGTGGAAATGACCTTCATAAGGAAAGACGTTTGATTGGGAAAGGTGGAGATAGTGAAGCCCTTCAAAAGTATTTGATGAGGATGCAGGAGAAAGATAGTAACTTCTTCTATGCAATCGATTGGGATGATTTCTTCCGCGTGAGGAATGTCTTTTGGGCTGATGGAAGGAGTAGAGCTACATATGAATCATTTGGTGATGTGGTGACAGTTGATACTACATATCTCTTTAATCAATACAAAGTGCCACTTGCAACTTTTGTTGGAGTAAACCATCATGGGCAACCTGTACTCTTTGGTTGTGGGTTGTTGTCATGTGATGACTCAGAGTCATTCATTTGGCTGTTTCAATCATGGCTACGCTGCATGTCTGGTGTGCCACCTCAAGGAATCATAACAGATCAGTGTGAGGCCGTGCAAAAGGCAATCGAAGCTGTGTTCCCCTCCACTCGACACCGTTGGTGTTTATCATGTATTATGAAAAAGGTTCCACAAAAATTACATGGATATGATAAGTACAAGTCCATAAGAGATCATCTGCAGAATGTTGTATATGATACACTCACAACAAATGAATTTGAGAGGAATTGGAAGAAGATCATGGAAGATTTTGGCCTTGAGGACAATAAATGGTTGAAGGAGTTGTTCCTTGAGCGACATCGTTGGGTTCCTCTCTTTGTAAAAGGTGATTTCTGGGCTGGAATGTCTATAAACCAACGTAGTGAAAGCATGCATGCATTTTTTGATGGATACGCAAACCACCATACTACTTTGAAGCAATTTGTTGATCACTATGATATTGCTTTGCAAGACAAGGTGGAGAAGGAGTTTGTAGCTGACATACATTCATCTTCTAGCACTCAGGCTTGTGTTACAAAATCTCCATTTGAGAGGCAGTTTCAATCTGCATATACTCATGCAAAATTTCTGGAGGTTCAAGATGAGTTTGTTGGGAAGGCTGATTGTAACGTTTCTGTTGCGAGTGACAACAGTTCTACTTGTCACTATAATGTCATTGAGGATGTGATGATAGGGAATGAGCCTAAGGAAACTGTGGTTGAAGTCACATTCGACAGGGCAAGTTGTGATGTGAAGTGCAATTGCTGCTTGTTCGAGTTCAAAGGGATACTTTGTAGGCATTCGCTTGCTATACTATCACAAGAGCGAGTGAAGGAGGTCCCGTGTAAATATATATTGAATAGATGGAGAAAAAGTGTAAAGAGGAAATATGTTTATATCAAAACCAGTTATGGTGTTCAGCATCTTAAGCCTCATATACAAAGGCTTGAATTGTTATGTAATCAATTCAATAGTGTTGCTGATTTTGCTGCTGAATTTGAAGAAACAAGTTCTCTCGCAGAGGCAACCCTATGTACCTTGAAGGAGAAACTTGAAGCATGGGCATCCCATTTAAGAAAATCTTCTAAGATGGATGGAGAGGAAGCTCAGGTCACTCTTCGATGA 1992 0.3981 MGDKDSNTPLDVDYSVCEENLTSHSPEECKLEIHNLNDNDVFPAPQVGMVFSSEDEVRLYYAKFANRQGFRFKTRTSKKGDDGRINYFILACSRVGISRGNRGMRNTSDSSRKENCKAKITVTLCEDGTFRILTVVLSHNHELLLHQTLKDIHIRRRRTSDLKDTEVSVKRTSELNDCGNDLHKERRLIGKGGDSEALQKYLMRMQEKDSNFFYAIDWDDFFRVRNVFWADGRSRATYESFGDVVTVDTTYLFNQYKVPLATFVGVNHHGQPVLFGCGLLSCDDSESFIWLFQSWLRCMSGVPPQGIITDQCEAVQKAIEAVFPSTRHRWCLSCIMKKVPQKLHGYDKYKSIRDHLQNVVYDTLTTNEFERNWKKIMEDFGLEDNKWLKELFLERHRWVPLFVKGDFWAGMSINQRSESMHAFFDGYANHHTTLKQFVDHYDIALQDKVEKEFVADIHSSSSTQACVTKSPFERQFQSAYTHAKFLEVQDEFVGKADCNVSVASDNSSTCHYNVIEDVMIGNEPKETVVEVTFDRASCDVKCNCCLFEFKGILCRHSLAILSQERVKEVPCKYILNRWRKSVKRKYVYIKTSYGVQHLKPHIQRLELLCNQFNSVADFAAEFEETSSLAEATLCTLKEKLEAWASHLRKSSKMDGEEAQVTLR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1353 663 ProSiteProfiles Zinc finger SWIM-type profile. 527 565 IPR007527 GO:0008270
Lal11g1353 663 SMART 26again6 540 567 IPR006564 GO:0008270
Lal11g1353 663 Pfam FAR1 DNA-binding domain 60 144 IPR004330 -
Lal11g1353 663 Pfam MULE transposase domain 244 338 IPR018289 -
Lal11g1353 663 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 654 IPR031052 GO:0006355
Lal11g1353 663 Pfam SWIM zinc finger 539 562 IPR007527 GO:0008270
Lal11g1353 663 PANTHER OS03G0843700 PROTEIN 34 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1353 Lal-Chr11 17094281 17097168 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g1353 MULE 2.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1353 - K17604 gmx:102660547 917.916