Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1338 ATGAATGAGTTTGAGTGGATAAAAGCAACTTGTGATCCAATCAAAAAGTATCTGAACTCTCACTTCCATGCTCTGACCATGTCTTCTTCTTCTTACTATGTACACGATGTGTTTCTGAGTTTCAGAGGTGAAGACACTCGCAACAACATCACTAAATCTCTCTACAATGCCCTCACTGACCTCTCTATCAAAACCTTCATGGACAAGAATCTTGAGAAAGGAACAAAGGTCAAACCTGAATTATATAGAGCAATAGAAGGGTCTAGAATATCCATGGTTGTTTTCTCACCAAGGTATGCTGGATCAAGATGGTGTCTTGATGAACTTGTCAAGATTATGGAGTGTCATAGAAGTAATGGTCAACTTGTTGTGCCAGTGTTCTATAATGTTGACCCTGCACATGTACGCCATCAGATTGGTGATTTTGGTGATTCTTATACACAGCTTCTAAGGAAACAAAGATGGGTCAATCATGCACATGTCTTGGCTGAATGGAAGACAGCACTTACTGAGGCTGCTAACTTTGTTGGTTGGCCTGTTAAATCCGACAATTGCGTTTATCGCGGACCCAGAATTAAAACCTTGCATATTTACAATGTCATCAAGAATATTGTTCAGGATATTAACCGAAGGTTAGACAGCACATCCTTGCCTATTACAGATTTTCCGGTTGGGTTAGAATCTCGTGCGCGTGATGTGATTGAGCTTGTGAAAGGGAAATCAAGCGGAGTTCGTGTAATAGGGATATGGGGAATGGGAGGGTCTGGTAAAACAACCTTAGCCAAAGCCATCTTCAATAAAAGTCATAGGGATTTTGTAGGTACAAGTTTCCTTGCTAATATTAGAGAAGTTTGGGAGACAAATGGAGGACAAACTGATTTACAAGAACAGTTACTTACTGATATCCTTAAGTTAGAAAAGATGAAGATACATAACATTGAGTTGGGAAAGGCTATGATCAAGGGAAGACTAAGTGGAACTAAATCACTTGTTGTACTTGATGATGTGAGTAAGGACGAGCAATTACGAGCCCTATGCGGAAATCGTACATGGATTGGTCCAGAAAGTGTAGTAATCATTACAACCAGAGATGTGCGTGTACTTAATGTACTCAAAGTTGACCATGTCATCAAAACAAAGAAATTGAATGAAAGTGAGTCCCTTGAGTTGTTCAGTTGGCATGCTTTTCGGGAAGAAAGACCAATAAAAGACTTCACTGAACTCTCAACAAATGTAGTAGCTTATTGTGGAGGATTACCACTAGCTCTTGAAGTCCTTGGATCTTATTTGTGCGAGAGGACAACGCAAGAGTGGAGAAGTGTTTTGTCCAAACTAGAAATGATTCCCAATGATCGAGTACAAGAGAAATTGAGAATAAGCTTTGACGGTTTAAGGGATCATATGGAGAAGGGTATATTTCTTGACATATGTTGTTTTTTTATTGGCAAGAACAGAACCTATGTTAGGGAGATTCTGGATGGATGTGGACTTCATGCTGAAATTGGAATAACAGTCCTTCTGGAACGGAGCCTCATAAAAGTTGAAAAGAATAACAAACTCGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATTGTCCGTGAAAGTTCACCAGAGGAGCCTGAGAATCAGAGTCGGTTGTGGTGTCAGGAGGACGTACTTGATGTATTGAAAGAACATACTGGAACTAAAGCTATTGAGGGATTGGCTTTGAACTTGAAAAGATCCAGTAAAGTTCGCTTCAGTACCAAGGCTTTTGAGAAAATGAAGAAGCTGAGACTTTTGCAACTAAATGGAGTACAACTTGATGGAGATTATGGGTATCTTCCCAAATACCTGAGATGGGTTTATTGGCAAGGATTTCCTTTAAAATACACACCTGAAAACTTTTATCAGGGAAATGTAGTTGCTATTGACTTAAGACACAGTAATCTTAAGGTAGTTTGGAAGGAGCCTCAGGTTCTAGAGAGGCTGAAAACCCTCACTCTTAGTCATTCAAGGTACTTGACAAACACCCCGGATTTCTCAAAACTGCCGAATCTTGAAAAGCTCATCCTCAAAGATTGTCCAAGTTTGTCCGAGGTACACCCGTCTATTGGCGATCTCAGTAATCTTCTTCTTATAAATTTGAAAGACTGTGTGACACTAAGCAATCTCCCGAGGACGCTTTATAAGTTGAAATCTGTGAAAACTCTCATAATTTCTGGCTGTTCAAAGATTGACATATTGGAAGAAGATATTGAGCAGATGGAGTCCATGACAACTCTAATTGCAAAAGATACTGCTGTAAAACAAGTTCCCTTTTCAATATTAAGATTGAACATCGGATATATATCCTTATGTGGATATGAAGGATTATCATCTAACGTTTTTCCTTCTCTCATTCGTTCTTGGATGTCACCAACATTGAATCCTTTATCCTCTATTGACCCATTTTGGGGCATGTCTTCATCTCTAGTTTCCATGAATATGCATAGCAACAATTTGGTTGATCTACCATCAATGCTTAGCAGCCTTTCAAAACTTCGAAGTGTTTGGGTTCAATGCCACTCAGAGTTTCAAGTAACTCAAGATTTTAGAAGAATTCTGGATGGCCTATCTGATGTTAATGTAACTGAATTGAAAACATCAAAAATCTCAAAGCATTCTTTGAGATCTTTTTTGATTGGAATGGGAAGTTGCCGCCAAGTCTTCAATACTCTTAGCTGTAGCATATCACAGGAATTGACTGCTAGTGTTTCTAGTGATTTTTCTCTCCCGGGTGACAACTATCCTTGTTGGTTAACCTACACTGATGAAGGAAATTCAGTACTTTTTGAAGTTCCTCAAGTTAATGATTATTGTATGAAAGGAATGGTTTTGTGTGTTGTTTACTCATCTACCCCAGAAAACATAGCAGAGGAATGTCTTAGTGGTGTCTTGATTGTTAATTACACAAATTCCTTCATCCAGATTTACAAGCGAGACACGGTAATGTCCTTGAATGATGAGGAGTGGCAAGGCATAGTGTCAAATCTTGCACCTCAAGACAAAGTGGAGATTTGTGTGGCTTTCCAGCATAGATTGACTGTCAAGAAGACAACATTGTATCTAATATATGGTGACTCAGTTGACGGGAAAATCGAACCATCATCAGGGTCAATGATACCAGACAAAATGTTGTTAGATCCGGATTTGACAAAGCCAGACCTGACAGAGCCAATGAAGCTAGTCACAATGTTGTCAAATCCGGATCAGAAAGATACTCGAAAAAACTCCTGGTTCTGGTGCAACTGTTTTGCTCCAAAGAACTAA 3297 0.3925 MNEFEWIKATCDPIKKYLNSHFHALTMSSSSYYVHDVFLSFRGEDTRNNITKSLYNALTDLSIKTFMDKNLEKGTKVKPELYRAIEGSRISMVVFSPRYAGSRWCLDELVKIMECHRSNGQLVVPVFYNVDPAHVRHQIGDFGDSYTQLLRKQRWVNHAHVLAEWKTALTEAANFVGWPVKSDNCVYRGPRIKTLHIYNVIKNIVQDINRRLDSTSLPITDFPVGLESRARDVIELVKGKSSGVRVIGIWGMGGSGKTTLAKAIFNKSHRDFVGTSFLANIREVWETNGGQTDLQEQLLTDILKLEKMKIHNIELGKAMIKGRLSGTKSLVVLDDVSKDEQLRALCGNRTWIGPESVVIITTRDVRVLNVLKVDHVIKTKKLNESESLELFSWHAFREERPIKDFTELSTNVVAYCGGLPLALEVLGSYLCERTTQEWRSVLSKLEMIPNDRVQEKLRISFDGLRDHMEKGIFLDICCFFIGKNRTYVREILDGCGLHAEIGITVLLERSLIKVEKNNKLGMHDLLRDMGREIVRESSPEEPENQSRLWCQEDVLDVLKEHTGTKAIEGLALNLKRSSKVRFSTKAFEKMKKLRLLQLNGVQLDGDYGYLPKYLRWVYWQGFPLKYTPENFYQGNVVAIDLRHSNLKVVWKEPQVLERLKTLTLSHSRYLTNTPDFSKLPNLEKLILKDCPSLSEVHPSIGDLSNLLLINLKDCVTLSNLPRTLYKLKSVKTLIISGCSKIDILEEDIEQMESMTTLIAKDTAVKQVPFSILRLNIGYISLCGYEGLSSNVFPSLIRSWMSPTLNPLSSIDPFWGMSSSLVSMNMHSNNLVDLPSMLSSLSKLRSVWVQCHSEFQVTQDFRRILDGLSDVNVTELKTSKISKHSLRSFLIGMGSCRQVFNTLSCSISQELTASVSSDFSLPGDNYPCWLTYTDEGNSVLFEVPQVNDYCMKGMVLCVVYSSTPENIAEECLSGVLIVNYTNSFIQIYKRDTVMSLNDEEWQGIVSNLAPQDKVEICVAFQHRLTVKKTTLYLIYGDSVDGKIEPSSGSMIPDKMLLDPDLTKPDLTEPMKLVTMLSNPDQKDTRKNSWFWCNCFAPKN 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1338 1098 SUPERFAMILY L domain-like 522 850 - -
Lal11g1338 1098 Pfam TIR domain 35 208 IPR000157 GO:0007165
Lal11g1338 1098 Gene3D - 32 209 IPR035897 -
Lal11g1338 1098 ProSiteProfiles TIR domain profile. 33 173 IPR000157 GO:0007165
Lal11g1338 1098 SMART till_3 34 175 IPR000157 GO:0007165
Lal11g1338 1098 Gene3D - 210 377 IPR027417 -
Lal11g1338 1098 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 1034 IPR044974 GO:0006952
Lal11g1338 1098 Gene3D - 381 465 IPR042197 -
Lal11g1338 1098 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 37 1034 - -
Lal11g1338 1098 PRINTS Disease resistance protein signature 246 261 - -
Lal11g1338 1098 PRINTS Disease resistance protein signature 323 337 - -
Lal11g1338 1098 PRINTS Disease resistance protein signature 416 430 - -
Lal11g1338 1098 PRINTS Disease resistance protein signature 654 670 - -
Lal11g1338 1098 Pfam NB-ARC domain 235 449 IPR002182 GO:0043531
Lal11g1338 1098 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 178 IPR035897 -
Lal11g1338 1098 Gene3D Ribonuclease Inhibitor 557 918 IPR032675 -
Lal11g1338 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 476 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1338 Lal-Chr11 16971698 16979399 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1338 224 867 WRKY Transcription Factor Family AT5G45050 29.838 2.36e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1338 - - gmx:100813173 1228.39