Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1336 ATGAATGAGTTCGAGTGGATAAAAGCAACTTGTGATCCAATCAAAAAGTATCTGAACTCTCACTTCCATGCTCTGACCATGTCTTCTTCTTCTTACTATGTACACGATGTGTTTCTGAGTTTCAGAGGTGAAGACACTCGCAACAACATCACTAATTCTCTCTACAATGCCCTCACTGACCTCTCTATCAAAACCTTCATGGACAAGAATCTTGAGAAAGGAACAAAGGTCAAACCTGAATTATATAGAGCAATAGAAGGGTCTAGAATATCCATGGTTGTTTTCTCACCAAGGTATGCTGGATCAAGATGGTGTCTTGATGAACTTGTCAAGATTATGGAGTGTCATAGAAGTAATGGTCAACTTGTTGTGCCAGTGTTCTATAATGTTGACCCTGCACATGTACGCCATCAGATTGGTGATTTTGGTGATTCTTATACACAGCTTCTAAGGAAACAAAGATGGGTCAATCATGCACATGTCTTGGCTGAATGGAAGACAGCACTTACTGAGGCTGCTAACTTTGTTGGTTGGCCTGTTAAATCCGACAATTACAATGTCATCAAGAATATTGTTCAGGATATTAACCGAAGGTTAGACAGCACATCCTTGCCTATTACAGATTTTCCGGTTGGGTTAGAATCTCGTGCGCGTGATGTGATTGAGCTTGTGAAAGGGAAATCGAGCGGAGTTCGTGTAATAGGGATATGGGGAATGGGAGGGTCTGGTAAAACAACCTTAGCCAAAGCCATCTTCAATAAAAGTCATAGGGATTTTGTAGGTACAAGTTTCCTTGCTAATATTAGAGAAGTTTGGGAGACAAATGGAGGACAAACTGATTTACAAGAACAGTTACTTACTGATATCCTTAAGTTAGAAAAGATGAAGATACATAACATTGAGTTGGGAAAGGCTATGATCAAGGGAAGACTAAGTGGAACTAAATCACTTGTTGTACTTGATGATGTGAGTAAGGACGAGCAATTACGAGCCCTATGCGGAAATCGTACATGGATTGGTCCAGAAAGTGTAGTAATCATTACAACCAGAGATGTGCGTGTACTTAATGTACTCAAAGTTGACCATGTCATCAAAACAAAGAAATTGAATGAAAGTGAGTCCCTTGAGTTGTTCAGTTGGCATGCTTTTCGGGAAGAAAGACCAATAAAAGACTTCACTGAACTCTCAACAAATGTAGTAGCTTATTGTGGAGGATTACCACTAGCTCTTGAAGTCCTTGGATCTTATTTGTGCGAGAGGACAACGCAAGAGTGGAGAAGTGTTTTGTCCAAACTAGAAATGATTCCCAATGATCGAGTACAAGAGAAATTGAGAATAAGCTTTGACGGTTTAAGGGATCATATGGAGAAGGGTATATTTCTTGACATATGTTGTTTTTTTATTGGCAAGAACAGAACCTATGTTAGGGAGATTCTGGATGGATGTGGACTTCATGCTGAAATTGGAATAACAGTCCTTCTGGAACGGAGCCTCATAAAAGTTGAAAAGAATAACAAACTCGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATTGTCCGTGAAAGTTCACCAGAGGAGCCTGAGAATCAGAGTCGGTTGTGGTGTCAGGAGGACGTACTTGATGTATTGAAAGAACATACTGGAACTAAAGCTATTGAGGGATTGGCTTTGAACTTGAAAAGATCCAGTAAAGTTCGCTTCAGTACCAAGGCTTTTGAGAAAATGAAGAAGCTGAGACTTTTGCAACTAAATGGAGTACAACTTGATGGAGATTATGGGTATCTTCCCAAATACCTGAGATGGGTTTATTGGCAAGGATTTCCTTTAAAATACACACCTGAAAACTTTTATCAGGGAAATGTAGTTGCTATTGACTTAAGACACAGTAATCTTAAGGTAGTTTGGAAGGAGCCTCAGGTTCTAGAGAGGCTGAAAACCCTCACTCTTAGTCATTCAAGGTACTTGACAAACACCCCGGATTTCTCAAAACTGCCGAATCTTGAAAAGCTCATCCTCAAAGATTGTCCAAGTTTGTCCGAGGTACACCCGTCTATTGGCGATCTCAGTAATCTTCTTCTTATAAATTTGAAAGACTGTGTGACACTAAGCAATCTCCCGAGGACGCTTTATAAGTTGAAATCTGTGAAAACTCTCATAATTTCTGGCTGTTCAAAGATTGACATATTGGAAGAAGATATTGAGCAGATGGAGTCCATGACAACTCTAATTGCAAAAGATACTGCTGTAAAACAAGTTCCCTTTTCAATATTAAGATTGAACATCGGATATATATCCTTATGTGGATATGAAGGATTATCATCTAACGTTTTTCCTTCTCTCATTCGTTCTTGGATGTCACCAACATTGAATCCTTTATCCTCTATTGACCCATTTTGGGGCATGTCTTCATCTCTAGTTTCCATGAATATGCATAGCAACAATTTGGTTGATCTACCATCAATGCTTAGCAGCCTTTCAAAACTTCGAAGTGTTTGGGTTCAATGCCACTCAGAGTTTCAAGTAACTCAAGATTTTAGAAGAATTCTGGATGGCCTATCTGATGTTAATGTAACTGAATTGAAAACATCAAAAATCTCAAAGCATTCTTTGAGATCTTTTTTGATTGGAATGGGAAGTTGCCGCCAAGTCTTCAATACTCTTAGCTGTAGCATATCACAGGAATTGACTGCTAGTGTTTCTAGTGATTTTTCTCTCCCGGGTGACAACTATCCTTGTTGGTTAACCTACACTGATGAAGGAAATTCAGTACTTTTTGAAGTTCCTCAAGTTAATGATTATTGTATGAAAGGAATGGTTTTGTGTGTTGTTTACTCATCTACCCCAGAAAACATAGCAGAGGAATGTCTTAGTGGTGTCTTGATTGTTAATTACACAAATTCCTTCATCCAGATTTACAAGCGAGACACGGTAATGTCCTTGAATGATGAGGAGTGGCAAGGCATAGTGTCAAATCTTGCACCTCAAGACAAAGTGGAGATTTGTGTGGCTTTCCAGCATAGATTGACTGTCAAGAAGACAACATTGTATCTAATATATGGTGACTCAGTTGACGGGAAAATCGAACCATCATCAGGGTCAATGATACCAGACAAAATGTTGTTAGATCCGGATTTGACAAAGCCAGACCTGACAGAGCCAATGAAGCTAGTCACAATGTTGTCAAATCCGGATCAGAAAGATACTCGAAAAAACTCCTGGTTCTGGTGCAACTGTTTTGCTCCAAAGAACTAA 3258 0.3929 MNEFEWIKATCDPIKKYLNSHFHALTMSSSSYYVHDVFLSFRGEDTRNNITNSLYNALTDLSIKTFMDKNLEKGTKVKPELYRAIEGSRISMVVFSPRYAGSRWCLDELVKIMECHRSNGQLVVPVFYNVDPAHVRHQIGDFGDSYTQLLRKQRWVNHAHVLAEWKTALTEAANFVGWPVKSDNYNVIKNIVQDINRRLDSTSLPITDFPVGLESRARDVIELVKGKSSGVRVIGIWGMGGSGKTTLAKAIFNKSHRDFVGTSFLANIREVWETNGGQTDLQEQLLTDILKLEKMKIHNIELGKAMIKGRLSGTKSLVVLDDVSKDEQLRALCGNRTWIGPESVVIITTRDVRVLNVLKVDHVIKTKKLNESESLELFSWHAFREERPIKDFTELSTNVVAYCGGLPLALEVLGSYLCERTTQEWRSVLSKLEMIPNDRVQEKLRISFDGLRDHMEKGIFLDICCFFIGKNRTYVREILDGCGLHAEIGITVLLERSLIKVEKNNKLGMHDLLRDMGREIVRESSPEEPENQSRLWCQEDVLDVLKEHTGTKAIEGLALNLKRSSKVRFSTKAFEKMKKLRLLQLNGVQLDGDYGYLPKYLRWVYWQGFPLKYTPENFYQGNVVAIDLRHSNLKVVWKEPQVLERLKTLTLSHSRYLTNTPDFSKLPNLEKLILKDCPSLSEVHPSIGDLSNLLLINLKDCVTLSNLPRTLYKLKSVKTLIISGCSKIDILEEDIEQMESMTTLIAKDTAVKQVPFSILRLNIGYISLCGYEGLSSNVFPSLIRSWMSPTLNPLSSIDPFWGMSSSLVSMNMHSNNLVDLPSMLSSLSKLRSVWVQCHSEFQVTQDFRRILDGLSDVNVTELKTSKISKHSLRSFLIGMGSCRQVFNTLSCSISQELTASVSSDFSLPGDNYPCWLTYTDEGNSVLFEVPQVNDYCMKGMVLCVVYSSTPENIAEECLSGVLIVNYTNSFIQIYKRDTVMSLNDEEWQGIVSNLAPQDKVEICVAFQHRLTVKKTTLYLIYGDSVDGKIEPSSGSMIPDKMLLDPDLTKPDLTEPMKLVTMLSNPDQKDTRKNSWFWCNCFAPKN 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1336 1085 Gene3D - 196 364 IPR027417 -
Lal11g1336 1085 Gene3D - 368 452 IPR042197 -
Lal11g1336 1085 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 178 IPR035897 -
Lal11g1336 1085 Gene3D Ribonuclease Inhibitor 544 905 IPR032675 -
Lal11g1336 1085 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 37 1021 - -
Lal11g1336 1085 PRINTS Disease resistance protein signature 233 248 - -
Lal11g1336 1085 PRINTS Disease resistance protein signature 310 324 - -
Lal11g1336 1085 PRINTS Disease resistance protein signature 403 417 - -
Lal11g1336 1085 PRINTS Disease resistance protein signature 641 657 - -
Lal11g1336 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 463 IPR027417 -
Lal11g1336 1085 ProSiteProfiles TIR domain profile. 33 203 IPR000157 GO:0007165
Lal11g1336 1085 Pfam NB-ARC domain 222 436 IPR002182 GO:0043531
Lal11g1336 1085 Gene3D - 32 195 IPR035897 -
Lal11g1336 1085 SMART till_3 34 175 IPR000157 GO:0007165
Lal11g1336 1085 Pfam TIR domain 35 201 IPR000157 GO:0007165
Lal11g1336 1085 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 1021 IPR044974 GO:0006952
Lal11g1336 1085 SUPERFAMILY L domain-like 509 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1336 Lal-Chr11 16947604 16952969 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1336 84 761 WRKY Transcription Factor Family AT4G12020 30.472 6.84e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1336 - - gmx:100813173 1233.78