Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1335 ATGACAAATCTTATGTTGTTCATTCCCATTCCTATGGCTGAATCATCCGTCTTCTTCTTTGCTAACTCACTCTTAGCAAAGTTTGATTCTTCTCATATTTATGAAGCTTCTCTAGATATTGGTGTCTATGTCCATTTTCAGTCGATTAAAGAGTCTCTGGTATGCATCAAAGCTTGGGTTCAGAAGGTTGACCTTGAGATAAAACCACTCTATTTAAGAGAGTTTTTTATGAGGGAGATCAAGAATGTCTTATATGATGCTGAAAACGTGTTGGATGAATTTGAGTATGAAAGATTGCGAAATGAAGTAGTCAATGCTCATGTTAACTCCATAACCAAGGTAGCTCTCTTTTTCTCAACTTCTAATCCATTTGTTTTTGGTCTTAGAATGACTAAACAAATTAAACAATTAGACCAGAGATTATGCAGTATTAAACTTAAAATCGATAAGTATGGTTTTCAAATGATTGGTATTGTTGATGTACAAGAGGACAGAAGGAAGAGAAGCCTTAAAAGATCAGATTACAGTTATCCTCATCATGTGATGATAGGAAGGGAAGAAGATAAAGAAATAATCATAAAACTTTTGACGTATCAGAATCCCTATGGTTATGATCATCAAAGTGTTTCAGTTATCCCCATTGTGGGGATGGAAGGGTTGGGGAAGACCGCACTTGCACACTCTGTGTTCATTGATCAGAGGATAGATCAATCATTCTCATCCAAAATATGGGTGTCTGTTACTCATGGCTTTCACATTAAGCAAGTGATTGCTCAAATAATTCAGTGCATTACAGGTACACTAGTAGAAGTGGAGGAGCAACACATAAATCAACTAAGAATTATACTTCAAAAACAGAAGTTCCTACTTGTCTTGGATGATGTAGGGAATGAGGATCCTCTCAAATGGAGTGAGTTGAGGAATTTAATATCATCAGGTATGGAAGGAAGTAAAGTCTTAGTGACTACACGTAGTCATTCAACTGCTTCCATGATGGGCACCATTCCCTCTCACACTTTAAAGTGCCTTTCTATGGAAGATTCATTCTCTCTATTTCAAAAATGTGCATTTAGAGAAGGAGAAGAGAAAAACTTTCCAGATTTGATCAAGGTTGGGAGAGAAATTGTGAACAAATGTGGAGGGGTTCCTTTGGCAATAAAATCAATGGGGAGTATGCTAAATTCAAACTATGAGATAAATATTTGGAAATTTATGAGAGATAGGGAGTTTTGGGATTTGTCAATGATTAATCCCATTTTACCTGCACTCAGATTAAGCTATCTTCAGATGCCATCTCATTTGAAGCAATGTTTTGAAATGTTCTCCCTTTATCCAGATGATTTTGTATTTCACAGTCTCGAAGTAGCCTCGCTTTGGGCAGCACTAGGTTTCCTTCCATCACCAAACAAAGATGAAACTTTGATAGATGTTGCAAATCAATGTTTGCTCGAACTAATGTCAAGATCTTTTCTTCAGGAATTTGTCAACTTCGGCACTTCATATTATTTTCAAATACATAATTTGGTGAATGATCTTGCTCGGTATATTGCAAAAGATGACTGTCACATGGCAAGTACCAACTTCCAAATAGTATCAATGAATGTTCAACATCTATCTTTTGCCAAAAATGAGTTGCATAGTAATTATTTCACCACAAAGTCTTTTATAAGAACCATACTATTTCCTATTGAAGGAGTGGGGGCAAGCAGTGAAGCTTTCTTGAGTATGTGTATGTCAAGATGCAAGTACTTGCGGGTTTTAGACTTGAGTGATTCTACATATGAGACTTTGCCCTCGTCCACTGGTAAGTTGAGACATTTAAGGTTTCTTAGCCTTGAGCGTAATGAAAAAATTAAGAGAGTCCCTGATTCTATCTGCAACCTCTACAATTTGCAAGTCTTGAATCTTGTTGGGTGCACAAAGCTTGAAAAATTGCCAAAAGGATTAAGAAACCTGGTCAGTCTCCGACAATTGGGGATAACCACAAAGGAACCTGTTTTACCTGAGAATGACATTGCCTACCTGAATTCTCTTGAAATTCTAAATATTGAGTCTTGTGAGAATCTGAAGTCTCTTTTTGTAGAGGTAAAACTTCCCACTCTTAGAACATTGACAGTGACTAAATGCGGGAGCCTAGAGTCTTTGCCTCTTGATATTAACCATTTCCCTCGATTAGAAACTTTATTAGTTGATAACTGTGAGTATTTGGATTTGACAAATGGATATGATGATCTAAACTCCAACTTGAGGTTAAAAGCAATTCACCTTCATTCTTTGCCACAACTTTTGACCTTGCCTAGTTGGTTACAAGAATCCACAAACACATTACTATCCTTGATAATCGTTGATTGCAAGAACCTTGAGGTGCTTCCTGAATGGCTATCAACTTTGAGTTTTTTGGGATCATTTGGTATTATAAATTGTCCAAAGTTGATGTTTCTCCCGAATGATATTCACCACCTCACTGCCCTTGGATATTTAAGAATTGAAGGTTGTCCAGAATTATGTAGAAAATGCCAACCGCAAGTTGGAGAGTATTGGCCCAAAATATTTCACATCAATCAAATTTTCATTGATGAACCAGAAGATCTAAAACAAGACTAA 2604 0.366 MTNLMLFIPIPMAESSVFFFANSLLAKFDSSHIYEASLDIGVYVHFQSIKESLVCIKAWVQKVDLEIKPLYLREFFMREIKNVLYDAENVLDEFEYERLRNEVVNAHVNSITKVALFFSTSNPFVFGLRMTKQIKQLDQRLCSIKLKIDKYGFQMIGIVDVQEDRRKRSLKRSDYSYPHHVMIGREEDKEIIIKLLTYQNPYGYDHQSVSVIPIVGMEGLGKTALAHSVFIDQRIDQSFSSKIWVSVTHGFHIKQVIAQIIQCITGTLVEVEEQHINQLRIILQKQKFLLVLDDVGNEDPLKWSELRNLISSGMEGSKVLVTTRSHSTASMMGTIPSHTLKCLSMEDSFSLFQKCAFREGEEKNFPDLIKVGREIVNKCGGVPLAIKSMGSMLNSNYEINIWKFMRDREFWDLSMINPILPALRLSYLQMPSHLKQCFEMFSLYPDDFVFHSLEVASLWAALGFLPSPNKDETLIDVANQCLLELMSRSFLQEFVNFGTSYYFQIHNLVNDLARYIAKDDCHMASTNFQIVSMNVQHLSFAKNELHSNYFTTKSFIRTILFPIEGVGASSEAFLSMCMSRCKYLRVLDLSDSTYETLPSSTGKLRHLRFLSLERNEKIKRVPDSICNLYNLQVLNLVGCTKLEKLPKGLRNLVSLRQLGITTKEPVLPENDIAYLNSLEILNIESCENLKSLFVEVKLPTLRTLTVTKCGSLESLPLDINHFPRLETLLVDNCEYLDLTNGYDDLNSNLRLKAIHLHSLPQLLTLPSWLQESTNTLLSLIIVDCKNLEVLPEWLSTLSFLGSFGIINCPKLMFLPNDIHHLTALGYLRIEGCPELCRKCQPQVGEYWPKIFHINQIFIDEPEDLKQD 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1335 867 Pfam NB-ARC domain 209 405 IPR002182 GO:0043531
Lal11g1335 867 Gene3D - 162 335 IPR027417 -
Lal11g1335 867 Gene3D - 21 135 - -
Lal11g1335 867 SUPERFAMILY L domain-like 505 855 - -
Lal11g1335 867 Gene3D - 426 515 IPR036388 -
Lal11g1335 867 PRINTS Disease resistance protein signature 211 226 - -
Lal11g1335 867 PRINTS Disease resistance protein signature 282 296 - -
Lal11g1335 867 PRINTS Disease resistance protein signature 379 393 - -
Lal11g1335 867 PRINTS Disease resistance protein signature 673 689 - -
Lal11g1335 867 PANTHER OS05G0492600 PROTEIN 56 836 - -
Lal11g1335 867 Gene3D - 342 425 IPR042197 -
Lal11g1335 867 Gene3D Ribonuclease Inhibitor 529 697 IPR032675 -
Lal11g1335 867 Gene3D Ribonuclease Inhibitor 698 845 IPR032675 -
Lal11g1335 867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 439 IPR027417 -
Lal11g1335 867 PANTHER DISEASE RESISTANCE PROTEIN RP 56 836 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1335 Lal-Chr11 16944121 16946724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1335 191 835 WRKY Transcription Factor Family AT5G45050 21.746 3.48e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1335 - - lang:109334707 1220.68