Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1325 ATGGAAAAAGGGGCAAGTAAGAAGAAAGTTCTCTCTTTGGACCAGTTTATCTCTATTACCAATCCTCTTCTTGACTTAGAGAAGGAAGCTGAGATATCAAACTCAATTGCCACAGGCACGTCGAGGAATTTGGATAATGCTCAAAAGAGAGGCTCAACAATCCTTAACTTGAAGTGTGTGGATGTTCAGACAGGGCTTATGGGCAAATCTTTGATCGAATTCCAGTCTACAAAAGGAGATGTTCTTCCTGCGCACAAGTTTGGCATTCACGACGTTGTTGTTTTAAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGACAGGGTGTAGTTTACAGGTTAAAGGATTCATCAATAACTGTGGCCTTTGATGATATACCAGAAGATGGTTTAAACAGTCCCCTAAGGCTGGAAAAAGTAGCAAATGAGGTTACATATCGCAGGATGAAAGATGCATTAATACAGTTGAGTAAAGGAGTGCAGAAAGGTCCTGCCGCTGATCTAGTTCCTGTCTTATTTGGGGAGAGGGCACCAACAGTCTCCAAGAAGGATGTATCCTTTACCCCCTTTAATAAAAACCTCGATCACTCCCAGAAAGATGCAATTTCAAAAGCCCTATCATCGAAGAATGTGTTTTTGCTACATGGACCTCCCGGAACGGGAAAAACTACAACAGTGGTAGAAATTATATTACAAGAAGTGAAGCGTGGATCTAAGATTCTCGCTTGTGCTGCATCAAATATTGCTGTTGACAACATTGTTGAGCGGCTAGTTCCACATAGAGTTAAGCTGGTGAGAGTGGGACATCCTGCACGTTTATTGCCTCAAGTACTGGATAGTGCACTTGATGCTCAGGTACTACGAGGAGATAATAGTGGCCTTGCAAATGACATTCGGAAAGAAATGAAGGCATTGAATGGAAAGCTGCTGAAAACCAAAGACAAAAATACGAGGAGGGGTATACAAAAGGAGCTTAGGACTCTATCCAAAGAAGAGCGTAAAAGGCAGCAGCTTGCTGTAACAGATGTAATTAAAAGTGCCGATGTAGTATTGACAACTTTGATTGGGGCTTTTACGAAGAAACTACAGAGCACATCATTTGATTTGGTGATTATTGATGAAGCTGCTCAAGCACTTGAGATAGCATGTTGGATACCTCTGCTGAAGGGTTCAAGATGCATACTTTCAGGGGACCATCTTCAACTTCCTCCAACCATTCAAAGTGTTGAAGCTGAGAAGAAAGGCTTAGGAAGAACCCTCTTTGAAAGACTTGCAGAAATGTATGGAGATGAAGTCACATCTATGCTTACTGTCCAGTACCGTATGCATGAACTTATCATGGATTGGTCTTCTAAAGAGCTTTACAACAGCAAGGTCAAGGCTCATGCAAGTGTTGCTGCTCATATGCTGTATGATCTCGAGGATGTGAAGAAGACATCTTCGACTGAACCAACCCTTCTTCTCATAGACATAGCTGGATGCGATATGGAAGAAAAGAAAGATGAAGAAGATAGCACCCTTAATGAAGGTGAAGCTGAGGTAGCTGTGGCTCACGCAAACAGACTAGTGCAAAGTGGGGTGCTTCCTTCTGATATTGGAATTATAACTCCATATGCCGCACAGGTTGTTTTACTCAAGACGTTGAGAAACAATGACGTTCGGCTGAAGGATGTTGAAATTTCAACAGTTGATGGCTTCCAGGGAAGGGAGAAAGAAGCCATTATTATATCAATGGTTCGATCCAACTCAAAGAAAGAGGTGGGCTTTTTGAGTGATCGAAGGCGAATGAATGTGGCTGTGACACGGGCAAGAAGGCACTGCTGTCTTGTGTGTGACACTGATACAGTCACTGGTGATGGATTTCTAAAGCGATTGATTGAGTATTTTGAAGAAAATGGTGAGTATCAGAGTGCATCCGAGTACCAGAATGAGTAG 1938 0.4241 MEKGASKKKVLSLDQFISITNPLLDLEKEAEISNSIATGTSRNLDNAQKRGSTILNLKCVDVQTGLMGKSLIEFQSTKGDVLPAHKFGIHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVQKGPAADLVPVLFGERAPTVSKKDVSFTPFNKNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKTKDKNTRRGIQKELRTLSKEERKRQQLAVTDVIKSADVVLTTLIGAFTKKLQSTSFDLVIIDEAAQALEIACWIPLLKGSRCILSGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGDEVTSMLTVQYRMHELIMDWSSKELYNSKVKAHASVAAHMLYDLEDVKKTSSTEPTLLLIDIAGCDMEEKKDEEDSTLNEGEAEVAVAHANRLVQSGVLPSDIGIITPYAAQVVLLKTLRNNDVRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRHCCLVCDTDTVTGDGFLKRLIEYFEENGEYQSASEYQNE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1325 645 SMART AAA_5 209 461 IPR003593 -
Lal11g1325 645 SMART ultradead3 191 442 IPR014001 -
Lal11g1325 645 Gene3D - 21 425 IPR027417 -
Lal11g1325 645 Gene3D - 39 141 - -
Lal11g1325 645 Pfam AAA domain 418 614 IPR041679 -
Lal11g1325 645 Gene3D - 441 645 IPR027417 -
Lal11g1325 645 CDD SF1_C_Upf1 443 631 IPR041679 -
Lal11g1325 645 CDD DEXXQc_SMUBP2 194 442 - -
Lal11g1325 645 Pfam AAA domain 195 409 IPR041677 GO:0004386
Lal11g1325 645 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 6 643 - -
Lal11g1325 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 626 IPR027417 -
Lal11g1325 645 PANTHER HELICASE WITH ZINC FINGER 2 6 643 - -
Lal11g1325 645 Coils Coil 296 316 - -
Lal11g1325 645 TIGRFAM TIGR00376: putative DNA helicase 343 640 IPR004483 GO:0003677|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1325 Lal-Chr11 16858646 16865842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1325 136 378 Core DNA Replication Machinery Family AT1G08840 27.016 4.75e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1325 K19036 - gmx:100810545 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1325 11 16858646 16865842 Lal11g1325 11 16858646 16865842 ECH