Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1312 ATGGCTACTAGATTCTGTACATACCTTTTCATTCTCTCACTCACTTTCACAATCTTCAATCTCATTTCATCTTCTTCATCACCAGAAACAAATACCCTTCTCACATTCAAAGCCTCAATCCAAGACTCCAAGAATGCTTTATCTACTTGGTCCAACACTTCATCAAACCACTATTGTAACTGGACTGGAATCTCATGCTCCAATACTGAACCACTCTCACTAACTTCTATTAACCTTCAAAGTTTAAACCTTTCTGGTGATATTTCTTCTTCTATATGTGACTTACCAAACCTCTCTTATCTCAACCTTGCTGATAATATATTCAACCAGCCTATTCCACTTCACCTTTCACAGTGCAGTTTCTTGGAAACTTTGAATCTAAGTAACAATCTTATATGGGGTACTATCCCATCTCAGATTTCTCAGTTTGGTTCATTGAAAGTACTTGACTTAAGTAGAAACCATATAGAAGGAAATATCCCTGAAAGCTTAGGTTCATTGAACAATCTTCAAGTACTTAAAATGGGAAGTAACTTGCTTTCAGGTAATGTGCCTGCTATTTTTGGAAACTTAAGTAAGCTTGAAGTGCTTGATTTTTCTCAAAATCCATACTTGGTGAGTCAGATACCTGAGGATATTGGTGAACTTAGAAGTTTAAAGCAACTTTTGCTTCAAAGTTCTTCTTTTCAAGGTGAGATTCCAGGTTCTTTTGTTGGTCTTCAGAGTTTGACACATTTGGATCTATCTGAGAATAATCTTACAGGTTTGGTTCCAAAGTCTCTAGTTTCTTTGAAGAATCTAGTTTCCTTTGATGTTTCACAGAACAAGATTTCAGGACCCTTTCCAAATGGCATTTGTAAAGGCCTTATTATAAATCTCAGCCTCCACACAAATACCTTCACAGGTTCAATATCAAACAGTTATATTAGTGAATGTGAGAGTCTTGAGAGATTCCAAGTCCAGAACAATGGTTTCTCTGGAGATTTCCCTATTGATATTTTTTCATTACCTAAAATCAAGCTCATTAGAGCTGAAAATAATAGATTCTCTGGTCAAATACCTGAGTCAATTTCAAAAGCTGTTTTTTTAGAGCAAGTTCAGTTTGACAATAACAGCTTTTCTGGTAAAATCCCTCAAGGACTTGGCTTTGTCAAGAGCTTATACAGATTCTCAGCTTCTTTAAATCACTTCTATGGTGAACTTCCTCCAAATTTTTGTGACTCGCCAGTTATGAGTATAGTAAACCTCTCCCATAATTCACTTTCTGGTCAAATCCCTCAGCTGAAAAAATGCAGGAAACTTGTGTCATTGTCTTTGGCTGATAATCATGTAACTGGAGAAATACCAACTTCACTTTCTGAGTTACCAGTGTTAACTTATCTTGACCTCTCAGATAACAATCTCACTGGTTCAATCCCACAAGGGCTTCAAAACTTGAAACTTGCACTTTTCAATGTTTCCTTCAATCAACTTTCTGGTAAAGTACCATACTCCTTGATTTCAGGTCTACCTGCCTCATTTTTGGAGGGTAACCCTGATCTTTGTGGACCTGGATTACCAAACTCATGTTCTGATGATGATATGCCAAGGCATCATAATAGTGGTCTTACAATCTTAACATGTGCAATGATCTCTTTAGCCTTTGTTGTTGGAACTGGCATTGTTGTTGGTGGATTTGTATTGTATAGGAGATCTTGCAAGGGGAACGATGACGAAGTAGGTGTTTGGCGCTCGGTGTTCTTCTACCCTCTTAGAATCACTGAGAATGATTTACTTATTGGGATGAATGAGAAAAGCTCATTAGGGGAAGGTGGAATTTTTGGTAAAGCTTATGTAGTGAATTTGCCTAGTGGTGAATTAGTAGCTGTGAAGAAGCTAGTTAATTTTGGAAACCAGTCTTGGAAGAGTTTGAAAGCTGAGGTGAAAACTTTGGCAAGGATTAGGCATAAAAATGTTGTTAAAATTTTGGGGTTCTGTCATTCTGATGAGTCAATTTTTCTGATATATGAGTACTTGAATAAAGGAAGCTTAGGGGATTTGATTTCAAGTCAGGATTTTCAGTTGCATTGGGGAGTTAGATTGAGGATTGCTATTGGAATTGCTCAAGGAATTGCTTATCTTCACAAAGATTATGTCCCACACTTGCTTCACAGAAATGTCAAGTCAAACAACATTCTGTTGGATGCAAACTTTGAGCCAAAGCTAACTGATTTTGCTCTTGATAGAGTCTTGGGAGAAGCTGCTTTTCTGTCAACTCTGGATTCTGAAGGAGCATCTTCATGTTACAATGCACCAGAATATGGTTACAACAAGAAACCAACAGAAGAATTGGATGTGTACAGTTTTGGTGTTGTGTTGGTAGAGCTAGTGAGTGGGAGACAAGCAGAGGCAACAGAGTCAAATGATGTCTCACTTGACATAGTGAAATGGGTTAGAAGGAAAGTGAACATAACTAATGGGGTGCAACAAATTCTTGACCCTAGAATATCACATACTTGTCACCAAGCAATGATTGGAGCATTAGATATAGCTCTTAGTTGCACTTCTGTGGTGCCTGAAAAAAGACCATCAATGGTACAAGTCATTAGAGGTCTTCAGTCCCTTGAGTCAAGGACTTGCATTGCAAATTTGCAGGATCCAAATGAGGAACATTCAATTCCTCTCTGA 2667 0.3772 MATRFCTYLFILSLTFTIFNLISSSSSPETNTLLTFKASIQDSKNALSTWSNTSSNHYCNWTGISCSNTEPLSLTSINLQSLNLSGDISSSICDLPNLSYLNLADNIFNQPIPLHLSQCSFLETLNLSNNLIWGTIPSQISQFGSLKVLDLSRNHIEGNIPESLGSLNNLQVLKMGSNLLSGNVPAIFGNLSKLEVLDFSQNPYLVSQIPEDIGELRSLKQLLLQSSSFQGEIPGSFVGLQSLTHLDLSENNLTGLVPKSLVSLKNLVSFDVSQNKISGPFPNGICKGLIINLSLHTNTFTGSISNSYISECESLERFQVQNNGFSGDFPIDIFSLPKIKLIRAENNRFSGQIPESISKAVFLEQVQFDNNSFSGKIPQGLGFVKSLYRFSASLNHFYGELPPNFCDSPVMSIVNLSHNSLSGQIPQLKKCRKLVSLSLADNHVTGEIPTSLSELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPDLCGPGLPNSCSDDDMPRHHNSGLTILTCAMISLAFVVGTGIVVGGFVLYRRSCKGNDDEVGVWRSVFFYPLRITENDLLIGMNEKSSLGEGGIFGKAYVVNLPSGELVAVKKLVNFGNQSWKSLKAEVKTLARIRHKNVVKILGFCHSDESIFLIYEYLNKGSLGDLISSQDFQLHWGVRLRIAIGIAQGIAYLHKDYVPHLLHRNVKSNNILLDANFEPKLTDFALDRVLGEAAFLSTLDSEGASSCYNAPEYGYNKKPTEELDVYSFGVVLVELVSGRQAEATESNDVSLDIVKWVRRKVNITNGVQQILDPRISHTCHQAMIGALDIALSCTSVVPEKRPSMVQVIRGLQSLESRTCIANLQDPNEEHSIPL 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1312 888 Gene3D Ribonuclease Inhibitor 184 289 IPR032675 -
Lal11g1312 888 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Lal11g1312 888 SUPERFAMILY RNI-like 225 501 - -
Lal11g1312 888 Pfam Protein kinase domain 597 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1312 888 Gene3D Transferase(Phosphotransferase) domain 1 672 884 - -
Lal11g1312 888 SMART LRR_typ_2 95 119 IPR003591 -
Lal11g1312 888 SMART LRR_typ_2 240 263 IPR003591 -
Lal11g1312 888 SMART LRR_typ_2 455 478 IPR003591 -
Lal11g1312 888 SMART LRR_typ_2 143 167 IPR003591 -
Lal11g1312 888 SMART LRR_typ_2 264 288 IPR003591 -
Lal11g1312 888 SMART LRR_typ_2 191 216 IPR003591 -
Lal11g1312 888 Gene3D Phosphorylase Kinase; domain 1 589 671 - -
Lal11g1312 888 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lal11g1312 888 Gene3D Ribonuclease Inhibitor 290 532 IPR032675 -
Lal11g1312 888 SUPERFAMILY Protein kinase-like (PK-like) 599 864 IPR011009 -
Lal11g1312 888 SUPERFAMILY L domain-like 26 287 - -
Lal11g1312 888 ProSiteProfiles Protein kinase domain profile. 595 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1312 888 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Lal11g1312 888 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Lal11g1312 888 Pfam Leucine rich repeat 122 180 IPR001611 GO:0005515
Lal11g1312 888 PANTHER OSJNBB0022F23.6 PROTEIN 7 876 - -
Lal11g1312 888 ProSiteProfiles Leucine-rich repeat profile. 145 167 IPR001611 GO:0005515
Lal11g1312 888 ProSiteProfiles Leucine-rich repeat profile. 457 480 IPR001611 GO:0005515
Lal11g1312 888 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 876 - -
Lal11g1312 888 PRINTS Leucine-rich repeat signature 243 256 - -
Lal11g1312 888 PRINTS Leucine-rich repeat signature 455 468 - -
Lal11g1312 888 ProSiteProfiles Leucine-rich repeat profile. 242 263 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1312 Lal-Chr11 16765690 16769105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1312 1 868 Receptor kinase-like Gene Family AT5G06940 61.802 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal11g1312 Pkinase 4.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1312 - - gmx:100794428 1457.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1312 11 16765690 16769105 Lal11g1312 11 16765690 16769105 ECH
Lal11g1312 11 16765690 16769105 Lal1g1704 1 19491633 19495536 LSH