Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1292 ATGTCTCACTCTCAACAACAGTATCTAGAGCCTCACTGTGTATGGGGTTCATCCCATTCCACTTGCACTGGTGTGGTGCAATTCCCTGCCAACTTCTCAATGCCGTTTTCTAATGAAGCAGTAGTGGCTGCCACTACAGCGGCGGCAAAAGCAAATGAGGACAGTGTGTTATTGTCACCATCACCACCGGTGTCAGTTTCACGCAAGAGGGGAAGGGCTTGGACCGAAGAGGAACATAAGTTGTTTCTTATTGGTCTTGAGGAATTTGGCAAAGGAGATTGGAAAAATATCTCAAGAATTTCAGTTCAGTCAAAAACTCCTTCTCAGGTTGCTAGTCATGCCCAAAAATATTTCATTCGAATAGGTACTCAAGAGAAGAAAAGGAAAAGCATTCATGATATAACTTTAAATGAATCTGATCACATCCTTCTCTCTCGTTCTATTAATCACCACAATTTGGTTCCTCTTCCACAAAATCAATGTCTTGAGATAGCATCAAAAGAGTGGAATCCTCATTACACTAATCACCAAAATTTGATTTTTCGTTCACAACATGGGTATCTTGACATACCACAAGAGGTGTCTAACCCTAAGCAGGTGTTGGTTCCTCACTGCAGTAATCACCAAAATTGGTTTGCTTTGAATCAAAATCTCGATATAGAAATAATGCAGTTGCCAATAATTCCAAACTACAGTGATCATCAGAATTGGAGTGCTCCTAATGAGATTTTGAATACAAACCCAACGCATTTGCCTACTATTCCCCACTCTAATGATTATCAAAATTGGTCTGCTCCTACTCAGAATCTGGATAGAGAATCAATGCAGTTGCCTATAATTTCTCACTCCAGTGATCATCAAACTTGGTTTGCCGATCCTATGCAGAATTTGGATAAAAAACCAATGCAGTTGCCTACAATTCCTCACTCCACTTACCATCAAAATTGTTTTGCTTCTATTCAGAATCTGGAAACAACACCAATGAAGTTGCCAACAATTCCTCACTCTAGTGATCATCAAGATTGGTTTGCTCCAGTTCAAAATTTGGATACAAAACCAATGTTGTTTCCAACAATTCCTCACTCCATTGACCATCAAACTTCAATTATTTCTCCTCAAAATTGGGATCTTCCATCCGAGAATTGGACTACTAATCCCATTGATATTGGGGTTTTGCTAGAACAACAACCATTATCTTTGCTACCACCAAACAAATTTCCTCTTCATCAAAAGAATTATTAG 1242 0.3913 MSHSQQQYLEPHCVWGSSHSTCTGVVQFPANFSMPFSNEAVVAATTAAAKANEDSVLLSPSPPVSVSRKRGRAWTEEEHKLFLIGLEEFGKGDWKNISRISVQSKTPSQVASHAQKYFIRIGTQEKKRKSIHDITLNESDHILLSRSINHHNLVPLPQNQCLEIASKEWNPHYTNHQNLIFRSQHGYLDIPQEVSNPKQVLVPHCSNHQNWFALNQNLDIEIMQLPIIPNYSDHQNWSAPNEILNTNPTHLPTIPHSNDYQNWSAPTQNLDRESMQLPIISHSSDHQTWFADPMQNLDKKPMQLPTIPHSTYHQNCFASIQNLETTPMKLPTIPHSSDHQDWFAPVQNLDTKPMLFPTIPHSIDHQTSIISPQNWDLPSENWTTNPIDIGVLLEQQPLSLLPPNKFPLHQKNY 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1292 413 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 52 184 IPR043363 -
Lal11g1292 413 SMART sant 70 120 IPR001005 -
Lal11g1292 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Lal11g1292 413 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 52 184 - -
Lal11g1292 413 SUPERFAMILY Homeodomain-like 67 121 IPR009057 -
Lal11g1292 413 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 69 120 IPR006447 GO:0003677
Lal11g1292 413 CDD SANT 73 118 IPR001005 -
Lal11g1292 413 Pfam Myb-like DNA-binding domain 73 118 IPR001005 -
Lal11g1292 413 ProSiteProfiles SANT domain profile. 69 122 IPR017884 -
Lal11g1292 413 ProSiteProfiles Myb-like domain profile. 66 118 IPR001005 -
Lal11g1292 413 Gene3D - 72 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1292 Lal-Chr11 16570502 16572258 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal11g1292 Myb_DNA-binding 2.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1292 - - lang:109356171 151.754