Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1282 ATGAATGATCTTTTATCAACATCATTTCCTCACCGCCAACCGTTGCCGGAACACCACACGATCGAGATGAGCTCCGGCGGAGCGAATCTGGACAAGTTCTTCTCCGACGTGGAGGCGATCAAGGAGGAGCTAACGGAGCTTGAAAGCCTCCGGCAAAGGCTCAAAACCTCTAACGAAAACAGCAAGACGCTTCACAATGCCACTGCCGTGAAGAATCTCCGATCACAAATGGACGCTGATGTTGGACTCGCTCTAAGGAAAGCGAAGGTGGTTAAGCTTAAGTTGGAGGCTTTGGACCGGTCCAACGCTGCGAACCGGAGCGTGTCTGGTTGTGGACCCGGTTCTTCTTCTGACCGGACAAGGAGTTCGGTGGTGAACGGGTTGAAGAAGAAGCTGAAGGAGTCTATGGATAGCTTTAATGAGCTCCGGGAACAGATTTCATCGGAATATCGTGAAACGGTGCAACGCCGGTATTTCACTGTTACCGGCGATAATCCCGATGAGAAAACCCTAGACCTTTTGATCTCTTCAGGTGAGAGTGAAACATTCCTACAGAAAGCTATCCAAGAGCAAGGGAAGGGAAGAATTATTGACACCATAAATGAAATTCAAGAAAGGCATGATGCTGTGAAAGAGATAGAGAAGAATCTAAATGAGTTGCATCAAGTGTTCCTTGACATGTCTGTGTTGGTTCAATCTCAAGGTGAACAATTAGATGACATTGAAAGCCATGTAGCAAGAGCTAACTCATTTGTTACTACCGCAACTCATGAGTTTGAATTGGTTCATTTTGTTGCATCAGTGGGTGAGACAAGCATGGCATCAATTAGAATGATAGATATAGCTGTCAACTTTACAGATGGCATGTTTAAGGGAATGTACCACGGCAAGCAATGTCATGTTGCAGATATAGCAACGGTTTTGAGCAGGGCTTGGGCTGCTGGCGTCGACCGAATCATTGTAACTGGTGGGTCCCTTGAGGAATCAAGGGAAGCACTTGCAATTGCAGAAACAGATGGGCGACTTTTCTGCACAGTCGGTGTGCATCCAACACGTTGCAAGGAGTTTGAGGAGAGCGGAGATCCCGAAAAGCATTTTCAGGCTCTTCTGTCATTAGCTAAAGAGGGAATCCAGAAGGGGAAGGTGGTCGCAGTTGGAGAATGTGGTTTGGACTATGACAGACTTCATTTCTGCCCAGAAGAGATTCAAAAGAAGTATTTTGAGAAGCAATTTGAATTAGCACACATTACAAAACTGCCAATGTTTTTGCACATGCGGGAAGCTGCTGCAGATTTCTGTGAAATAGTTGAGAAAAATAAGGACAGGTTCACTGCTGGAGTCACCCATTCATTTACTGGTAGTATGGATGATTGCAATAAACTTCTCTCATTTGATAATATGTACATAGGCATAAACGGGTGCTCTCTGAAGACAACTGAGAACCTTGATGTTGTGAAGGGTATTCCTGCTGAGAGAATGATGATTGAGACCGACTCACCATACTGTGAAATTAAGAATACTCATGCAGGAATTGGTTTTGTTAAATCAACATGGCCTTCTAAGAAGAAAGAGAAGTATGATCAAGAGTGCATTGTCAAAGGTCGCAATGAACCTTGTTTAGTTAGGCAAGTTCTTGAGGTTGTTGCTGGCTGTAAAGGTATCAACGATGTAGGTGCCCTCAGCAAAACATTGTACCATAACACTTGCAGGGTTTTCTTCCCTCATGACTTGGATTCTGCAGCTGATGCTCTTCTAGTAGGCGTTAATTCTTCATAA 1776 0.4459 MNDLLSTSFPHRQPLPEHHTIEMSSGGANLDKFFSDVEAIKEELTELESLRQRLKTSNENSKTLHNATAVKNLRSQMDADVGLALRKAKVVKLKLEALDRSNAANRSVSGCGPGSSSDRTRSSVVNGLKKKLKESMDSFNELREQISSEYRETVQRRYFTVTGDNPDEKTLDLLISSGESETFLQKAIQEQGKGRIIDTINEIQERHDAVKEIEKNLNELHQVFLDMSVLVQSQGEQLDDIESHVARANSFVTTATHEFELVHFVASVGETSMASIRMIDIAVNFTDGMFKGMYHGKQCHVADIATVLSRAWAAGVDRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCKEFEESGDPEKHFQALLSLAKEGIQKGKVVAVGECGLDYDRLHFCPEEIQKKYFEKQFELAHITKLPMFLHMREAAADFCEIVEKNKDRFTAGVTHSFTGSMDDCNKLLSFDNMYIGINGCSLKTTENLDVVKGIPAERMMIETDSPYCEIKNTHAGIGFVKSTWPSKKKEKYDQECIVKGRNEPCLVRQVLEVVAGCKGINDVGALSKTLYHNTCRVFFPHDLDSAADALLVGVNSS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1282 591 CDD SynN 30 187 IPR006011 GO:0016020
Lal11g1282 591 ProSitePatterns Syntaxin / epimorphin family signature. 206 245 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lal11g1282 591 PANTHER TATD FAMILY DEOXYRIBONUCLEASE 273 585 - -
Lal11g1282 591 SMART SynN_4 25 151 IPR006011 GO:0016020
Lal11g1282 591 MobiDBLite consensus disorder prediction 104 123 - -
Lal11g1282 591 SUPERFAMILY Metallo-dependent hydrolases 278 573 IPR032466 -
Lal11g1282 591 Coils Coil 125 149 - -
Lal11g1282 591 Pfam Syntaxin 32 235 IPR006011 GO:0016020
Lal11g1282 591 Pfam TatD related DNase 300 572 IPR001130 GO:0016788
Lal11g1282 591 Coils Coil 200 220 - -
Lal11g1282 591 Coils Coil 30 67 - -
Lal11g1282 591 CDD TatD_DNAse 278 573 IPR001130 GO:0016788
Lal11g1282 591 MobiDBLite consensus disorder prediction 1 26 - -
Lal11g1282 591 Gene3D - 28 252 - -
Lal11g1282 591 PANTHER DEOXYRIBONUCLEASE TATDN1-RELATED 273 585 - -
Lal11g1282 591 SMART tSNARE_6 195 262 IPR000727 -
Lal11g1282 591 SUPERFAMILY t-snare proteins 28 255 IPR010989 GO:0016020|GO:0016192
Lal11g1282 591 MobiDBLite consensus disorder prediction 104 124 - -
Lal11g1282 591 Gene3D - 266 578 - -
Lal11g1282 591 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 200 262 IPR000727 -
Lal11g1282 591 CDD SNARE_syntaxin1-like 199 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1282 Lal-Chr11 16492152 16500255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1282 24 260 SNARE and Associated Proteins AT3G11820 75.105 7.05e-126 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1282 K03424 - gmx:100814321 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1282 11 16492152 16500255 Lal11g1282 11 16492152 16500255 ECH