Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1277 ATGAACCACCGTCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCCCTCTATTTCCCTCTCCGCCACCGATCCAAACGACGTCGCAATCCTCCTCCAATTCAAGAAAACACTGAAAAACCCTTCACTGTTACCATGGCCTGAATCTAATAACCCCGACCCATGTGGTTCTCCTCAGTGGAAATACATCTTCTGCGATGGTAATAGAGTTTCTCAGATTCAAGTTAAGAACTTGAACCTCTCTGGTCCCTTACCTCAAAATTTTAACCAACTTTCGAAACTTAATAACATTGGTCTTCAAAATAATCATCTTAATGGTCCTCTTCCAACTTTTCGTGGCTTATCTAATCTACAAAAGGCTTTTTTAGATTTCAATGATTTTGATTCGATCCCTTTTGATTTCTTCGATGGGCTAACGAATCTTGATGAATTTGCATTGGATTATAATAACCTTAATGCTAGTAATGGGGGTTGGAATTTTCCTCCTTCGTTGGAGAATTCAGCGCAGTTGAGGAAATTATCATGTATGAGCTGCAATTTAGTGGGTTCCATGCCTGAATTTCTAGGAAAAATGAACTCTTTAACGGATTTGAAGCTATCTGGGAATGATTTGAGTGGAGAGATTCCGGCGAGTTTAAACTGCACCGGTTTGCAGATTCTGTGGTTGAATAACCAGATGGGTAATGGTATCAGTGGGACTCTTGATGTTGTGACAACTATGGTTTCTCTTGAAAGTTTATGGCTTCATGGGAACAAGTTCACTGGGTCTATTCCTGAGAGAGTTGGGGACTTGGTTTCTTTGAAGGATTTCAACCTCAATGGTAATCAACTTGTTGGGTTGGTCCCTGATGCTTTAGGTAATTTGCAATTGGATAATCTTGATTTGAACAATAATCACTTCATGGGTCCGATCCCGAATTTTAAAGCGGTTAATGTCACTTATGATTTTAATGATTTTTGTGAAACAAAACCCGGGGTTCCATGTGCTTTTGAAGTTATGGCATTATTGGGATTTTTAAATGGATTGAATTATCCTTCAAATCTGGTGAATTCATGGATTGGTGATAACCCATGTAAAGGGGAATGGCTTGGGATTAATTGCAATGCAAATGGAAAGGTGTCTATGATTAATTTGCCTAACATGAAATATAATGGTACTTTGAGTCCTTCTGTTGCAAATTTAGGTTCTCTTGTTGAAATCAGATTGGGGGGTAATAATCTCAGTGGTATAGTGCCTAGTAATTGGACTAGCTTGACATCACTGAATTTGTTGGATCTGAGTGGCAATAACATTTCGCCACCCCTGCCTAAGTTTAGTAATAGTGGCTTGAAATTTGTAACTGATGGGAATCCTCTTTTGAATGGTAACTTGGAGGCTCCTAGAAACGCTGAACCTTCACCAAAGTCAACACCAGCAGACTCAAATTCCAATTCAAGTGGTTCTCTTGAAACCAAAAATTCCAAAAGGAAAGTGTTGGTTTCGATTGTGGCCCCAATAGTGGGTGTGGCGGCTGCAGCTTTTGTGCTCATTCCCCTTTATGCATATTGTTTCAGGAGGAGAAAGGTTAGCTTCAAGGCTCCAAGTTCACTGGTCATTCACCCAAGAGATCCATCTGATTCAGATAGTATGGTAAAGATTGTTGTTGCTAATAATAACAATGGAAGCATTTCCACCGTAACGGGGAGTGGGTCCGTGAGTATAAACAGCAGCGCAACTGGGAGCTCTCATACCATTGAATCTGGAAATCTTGTTATATCCATTCTAGTTTTACGCAATGTGACCAAGAATTTTGCCGCTGAGAATGAACTTGGCCGTGGTGGATTTGGGGTTGTTTATAAGGGAGAATTGGATGATGGGACTAAAATTGCAGTAAAACGGATGGAAGCTGGTGTGATTAATAGCAAAGCCTTAGATGAATTCCAGGCTGAAATTACGGTTCTATCAAAAGTCCGTCATCGGCATCTAGTGTCCCTTTTGGGTTATTCCATTGCAGGAAATGAGAGAATTCTAGTTTATGAGTATATGCCACAGGGGGCTCTCAGTCAGCATCTTTTCCATTGGAAGAGCTTAAAACTGGAGCCCCTCTCGTGGAAAAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGATTGGAGTATCTTCATACACTGGCTCACCAGAGCTTCATTCACAGAGATCTTAAGTCATCAAATATTTTGCTCGCCGATGATTTTAGAGCGAAAATCTCAGATTTTGGATTGGTTAAACTTGCTCCTGATGGAGAAAAATCTGTAGTTACTCGGCTTGCTGGGACTTTTGGATACTTGGCACCAGAATATGCAGTCACAGGAAAAATCACTACCAAAACAGATGTTTTCAGTTTCGGGGTTGTTCTAATGGAGCTGTTGACCGGATTGATGGCACTTGATGATGATAGACCTGAGGAAAGCCAATATTTGGCGTCATGGTTCTGCCATATAAAATCCGATAAGGAGAAACTATTGTCTGCTATTGACCCAGCCCTTGACCTGAAGGAGGAAACATCCAAGACGGTTTCTGTCATTGCTGAGCTAGCTGGGCACTGCACTGCTAGAGAACCAGGCCAACGACCTGATATGGGTCATGCCGTGAATGTCCTATCACCGCTAGTTGAAAAATGGAAACCATTTGATAACGACACGGAGGAGTATTCCGGCATCGATTATAGCCTTCCTCTTAATCAGCTGGTGAAGGGTTGGCAGGAGGCAGAGGGAAAGGACATGAGTTATGTGAACCTTGAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGCTTCGCAGATTCTTTTACTTCGGCCGACGGCCGGTGA 2829 0.4214 MNHRLLLLLFLLLLPSISLSATDPNDVAILLQFKKTLKNPSLLPWPESNNPDPCGSPQWKYIFCDGNRVSQIQVKNLNLSGPLPQNFNQLSKLNNIGLQNNHLNGPLPTFRGLSNLQKAFLDFNDFDSIPFDFFDGLTNLDEFALDYNNLNASNGGWNFPPSLENSAQLRKLSCMSCNLVGSMPEFLGKMNSLTDLKLSGNDLSGEIPASLNCTGLQILWLNNQMGNGISGTLDVVTTMVSLESLWLHGNKFTGSIPERVGDLVSLKDFNLNGNQLVGLVPDALGNLQLDNLDLNNNHFMGPIPNFKAVNVTYDFNDFCETKPGVPCAFEVMALLGFLNGLNYPSNLVNSWIGDNPCKGEWLGINCNANGKVSMINLPNMKYNGTLSPSVANLGSLVEIRLGGNNLSGIVPSNWTSLTSLNLLDLSGNNISPPLPKFSNSGLKFVTDGNPLLNGNLEAPRNAEPSPKSTPADSNSNSSGSLETKNSKRKVLVSIVAPIVGVAAAAFVLIPLYAYCFRRRKVSFKAPSSLVIHPRDPSDSDSMVKIVVANNNNGSISTVTGSGSVSINSSATGSSHTIESGNLVISILVLRNVTKNFAAENELGRGGFGVVYKGELDDGTKIAVKRMEAGVINSKALDEFQAEITVLSKVRHRHLVSLLGYSIAGNERILVYEYMPQGALSQHLFHWKSLKLEPLSWKRRLNIALDVARGLEYLHTLAHQSFIHRDLKSSNILLADDFRAKISDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVTGKITTKTDVFSFGVVLMELLTGLMALDDDRPEESQYLASWFCHIKSDKEKLLSAIDPALDLKEETSKTVSVIAELAGHCTAREPGQRPDMGHAVNVLSPLVEKWKPFDNDTEEYSGIDYSLPLNQLVKGWQEAEGKDMSYVNLEDSKSSIPARPTGFADSFTSADGR 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1277 942 MobiDBLite consensus disorder prediction 923 942 - -
Lal11g1277 942 SUPERFAMILY Protein kinase-like (PK-like) 573 872 IPR011009 -
Lal11g1277 942 ProSiteProfiles Protein kinase domain profile. 596 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1277 942 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Lal11g1277 942 CDD STKc_IRAK 602 875 - -
Lal11g1277 942 Gene3D Transferase(Phosphotransferase) domain 1 674 892 - -
Lal11g1277 942 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Lal11g1277 942 MobiDBLite consensus disorder prediction 466 482 - -
Lal11g1277 942 Pfam Leucine rich repeat N-terminal domain 24 65 IPR013210 -
Lal11g1277 942 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Lal11g1277 942 PANTHER OSJNBA0070M12.3 PROTEIN 4 942 - -
Lal11g1277 942 SUPERFAMILY L domain-like 330 436 - -
Lal11g1277 942 MobiDBLite consensus disorder prediction 453 482 - -
Lal11g1277 942 Gene3D Phosphorylase Kinase; domain 1 558 673 - -
Lal11g1277 942 SUPERFAMILY L domain-like 21 306 - -
Lal11g1277 942 SMART serkin_6 596 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1277 942 Gene3D Ribonuclease Inhibitor 23 325 IPR032675 -
Lal11g1277 942 Pfam Protein tyrosine and serine/threonine kinase 599 870 IPR001245 GO:0004672|GO:0006468
Lal11g1277 942 SMART LRR_typ_2 239 262 IPR003591 -
Lal11g1277 942 SMART LRR_typ_2 393 416 IPR003591 -
Lal11g1277 942 SMART LRR_typ_2 263 286 IPR003591 -
Lal11g1277 942 SMART LRR_typ_2 113 136 IPR003591 -
Lal11g1277 942 SMART LRR_typ_2 417 441 IPR003591 -
Lal11g1277 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Lal11g1277 942 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1277 Lal-Chr11 16400987 16404919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1277 63 877 Receptor kinase-like Gene Family AT5G07280 31.389 2.97e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lal11g1277 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1277 - - gmx:100305366 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1277 11 16400987 16404919 Lal11g1277 11 16400987 16404919 ECH
Lal11g1277 11 16400987 16404919 Lal20g0194 20 1334404 1337890 LSH