Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1265 ATGTCAAATTTGAACGGTGCATACTACGGCCCCGCCGTCCCACCCCCAAAATCCTACCACCGCCCATCACGTAGCAGCGGCTGCGGCTGCTGCTGCGGCTGCCTCTTCAGTCTCATCTTCAAAATCATCATCACCATCGTCATCATAGTCGGCATCGCCGTCTTCCTCTTCTGGCTAATCGTCCGTCCCAACAAAGTCAAAGTCAACGTAACAGAAGCCACGCTCACACAATTCAACTACACCACTAACAACACACTATATTACAATCTTTCCCTCAACATCACTATTCGTAACCCTAACAAGAGACTCGGAATCTACTATGACTACATCGAAGCGCAACCGTTTTACCATGATGCAAGGTTCGATTTAATGACGCTTGAACCGTTCTACCAGGGTCATAAGACAACAAATGAGTTAAACGCTGCGTTTAAGGGTCAACATGTGATTGTGCTGGGTGCTGATCAGATTTCGGAACTGGATAAGGAGAAGATTTCTGGGGTTTATGATATTGAGGTGAAGATTTATCTTAAGATTAGGTTCAAGTTGGGTGTGTTGAAGACAGGGAAAATGAAACCCAATATTGACTGTGATTTGAAGGTTCCATTGACTACTTCAAACAATGGAAACTCGATTGATGGTAGTGCTTTTCAAACTACCAAGTGTGACTGGGGTTTCTGA 678 0.4484 MSNLNGAYYGPAVPPPKSYHRPSRSSGCGCCCGCLFSLIFKIIITIVIIVGIAVFLFWLIVRPNKVKVNVTEATLTQFNYTTNNTLYYNLSLNITIRNPNKRLGIYYDYIEAQPFYHDARFDLMTLEPFYQGHKTTNELNAAFKGQHVIVLGADQISELDKEKISGVYDIEVKIYLKIRFKLGVLKTGKMKPNIDCDLKVPLTTSNNGNSIDGSAFQTTKCDWGF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1265 225 PANTHER OS05G0367900 PROTEIN 19 223 IPR044839 GO:0098542
Lal11g1265 225 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 19 223 - -
Lal11g1265 225 Pfam Late embryogenesis abundant protein 93 193 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1265 Lal-Chr11 16315977 16316654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1265 60 203 SNARE and Associated Proteins AT1G32270 39.583 4.82e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1265 - - gmx:100793187 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1265 11 16315977 16316654 Lal13g1332 13 12316428 12317156 PCT
Lal13g1332 13 12316428 12317156 Lal11g1265 11 16315977 16316654 PCT