Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1254 ATGGCGGCTTTCAGAAAACTTATCTTCTCTAACCGTTCTCTGATTCCTCCTTCTCCTTTTCTTCTCACTTTCCGCAGAGGAATTGCTTTCAAACTTTTCGTCGGAGGATTGTCCTACTTCACAACAGAGAAAGTACTGTCAGATACATTCTCTAATTATGGACAAGTCGTTGAAGCTAAAATTATAACAGATAGAATGTCAGAAAAATCTAAAGGATTTGGATTTGTCACCTTTGCTTCACAGGATGAGGCTGAGAACGCCGTAACAGAGATGAATGGAAAGGCACTAAACGGACGTGTAATCTTTGTTGATTATGCTAAACTAACGACCAAGACCGGTGGTGGTGGAATGCCAATTGCCAGAGGACCTCCTGAGCCAGCTCCTGAACCAACACCAGACAGTTGA 405 0.4272 MAAFRKLIFSNRSLIPPSPFLLTFRRGIAFKLFVGGLSYFTTEKVLSDTFSNYGQVVEAKIITDRMSEKSKGFGFVTFASQDEAENAVTEMNGKALNGRVIFVDYAKLTTKTGGGGMPIARGPPEPAPEPTPDS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1254 134 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 1 128 - -
Lal11g1254 134 PANTHER TRANSFORMER-2-RELATED 1 128 - -
Lal11g1254 134 SUPERFAMILY RNA-binding domain, RBD 30 110 IPR035979 GO:0003676
Lal11g1254 134 SMART rrm1_1 31 104 IPR000504 GO:0003723
Lal11g1254 134 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 101 IPR000504 GO:0003723
Lal11g1254 134 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 30 108 IPR000504 GO:0003723
Lal11g1254 134 Gene3D - 28 126 IPR012677 -
Lal11g1254 134 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1254 Lal-Chr11 16222291 16224789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1254 30 107 Eukaryotic Initiation Factors Gene Family AT2G23350 34.615 3.32e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1254 - - lja:Lj1g3v4721740.1 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1254 11 16222291 16224789 Lal11g1254 11 16222291 16224789 ECH