Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1251 ATGTGGGCAAGTGCTGAAGGTGGTGCTCCAGAAGTTACTCTAGAAACTTCCATGGGTTCTTTCACCATCGAGCTATACTACAAGCATGCACCAAGAACTTGCAGGAACTTCATTGAACTATCTCGCAGAGGTTATTATGACAATGTTAAATTCCACAGAATTATTAAGGATTTCATTGTGCAAGGTGGGGATCCCACTGGAACAGGAAGAGGAGGAGAGTCCATATATGGGTATCCTGTTAAACTTTTCATTTTCCATGTTGATTATATGTTCAATGTAATGTCCTTGTCACCAAAATTTGAAGATGAGATTAAGCAAGAGTTGAAGCACACTGGAGCTGGTATCTTATCCATGGCAAATGCTGGTCCAAACTCTAATGGTAGTCAGTTCTTTATTACTCTGGCACCATGCCCGTCTCTTGATGGAAAGCACACAATTTTCGGAAGAGTATGTCGGGGGATGGAAATCATCAAAAGACTTGGTAGTGTCCAAACAGATAACAACGATAGGCCCATCCATGATGTGAAGATTCTGCGGACATCAGTGAAGGATTGA 555 0.418 MWASAEGGAPEVTLETSMGSFTIELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGYPVKLFIFHVDYMFNVMSLSPKFEDEIKQELKHTGAGILSMANAGPNSNGSQFFITLAPCPSLDGKHTIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRTSVKD 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1251 184 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 182 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 PIRSF Peptidylpro_ismrse 3 86 IPR024936 GO:0003755
Lal11g1251 184 PIRSF Peptidylpro_ismrse 94 184 IPR024936 GO:0003755
Lal11g1251 184 Gene3D - 2 184 IPR029000 -
Lal11g1251 184 SUPERFAMILY Cyclophilin-like 11 182 IPR029000 -
Lal11g1251 184 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 181 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 5 183 - -
Lal11g1251 184 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 141 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 IPR002130 GO:0000413|GO:0003755
Lal11g1251 184 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755|GO:0006457
Lal11g1251 184 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 183 IPR044666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1251 Lal-Chr11 16206726 16210111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1251 12 182 U-box Gene Family AT5G67530 44.444 1.70e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1251 K12733 - gmx:100786302 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1251 11 16206726 16210111 Lal11g1251 11 16206726 16210111 ECH