Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1219 ATGGCGGAAGAGCACCGATGCCAACAAGCACCAGAAGGTCATAGACTCTGTGCCAATAACTGCGGTTTCTTCGGTAGCCCAGCCACCATGAATCTCTGCTCCAAATGCTTCCGAGATATTCAATCCAACGAACAAGAACAAGCCAAAACCAAATCCACTATCCAATCCGCACTCTCCTCTTCCGCCACAACCACCACCACCACCACCGTTGAATCTCTCCCGGTAACCGTTGATTCCATTCCTCAATCGCTGTTATTGAATTCTCCCGAGATCGAAGCATCTGATTCAGTTTCCGCGTCCGTACTATCAGGTTCGGCTGGACCGGTTTTTGTTCCGGTTCAATCGAACCGGTGTGCGACGTGTAGAAAGCGAGTGGGTCTGACCGGGTTCAAGTGCAGGTGTGGGGTTACTTTCTGTGGGACCCACCGGTATCCAGAGAAACACGGGTGTGGGTTTGATTTCAAGTCGGTGGGGCGAGAGGAAATAGCGCGAGCGAATCCTGTTATCAAAGCTGAGAAGCTCGAAAAGATTTAA 534 0.5094 MAEEHRCQQAPEGHRLCANNCGFFGSPATMNLCSKCFRDIQSNEQEQAKTKSTIQSALSSSATTTTTTTVESLPVTVDSIPQSLLLNSPEIEASDSVSASVLSGSAGPVFVPVQSNRCATCRKRVGLTGFKCRCGVTFCGTHRYPEKHGCGFDFKSVGREEIARANPVIKAEKLEKI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1219 177 Pfam A20-like zinc finger 15 38 IPR002653 GO:0003677|GO:0008270
Lal11g1219 177 SMART A20_3 14 38 IPR002653 GO:0003677|GO:0008270
Lal11g1219 177 SUPERFAMILY AN1-like Zinc finger 112 172 IPR035896 -
Lal11g1219 177 ProSiteProfiles Zinc finger AN1-type profile. 112 158 IPR000058 GO:0008270
Lal11g1219 177 Gene3D - 94 173 IPR035896 -
Lal11g1219 177 ProSiteProfiles Zinc finger A20-type profile. 11 45 IPR002653 GO:0003677|GO:0008270
Lal11g1219 177 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 177 - -
Lal11g1219 177 Pfam AN1-like Zinc finger 118 154 IPR000058 GO:0008270
Lal11g1219 177 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 177 - -
Lal11g1219 177 SMART AN1_Zf_4 118 155 IPR000058 GO:0008270
Lal11g1219 177 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 16 60 - -
Lal11g1219 177 Gene3D - 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1219 Lal-Chr11 15922839 15923372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1219 1 177 C2H2 Transcription Factor Family AT3G52800 52.809 1.24e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1219 - - gmx:100527251 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1219 11 15922839 15923372 Lal11g1219 11 15922839 15923372 ECH