Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1212 ATGGCTTCATCATTATCTTCATTTGTTGGGAATGATTTAGAACGTTCTAGAAGCCGTGGCTTGAGCTTTGAAGAAGTGTGGAACAATGGTGGATCAGATGTATTCAATGTGAGTCGTCACTCACAAAATGATGATGAAGAAAATCTCAAATGGGCAGCCATAGAAAGATTACCAACTTATGATCGCATGAGAAAAGGGGTTTTGAAACAAATGCATGATGATGGAAAAATTGTGCATAATGAAATTGATATTGGTAACCTAAGGTTTCAAGATAAGAAGCTTCTAATGGATAAGATACTACACTTGGTGGAGCAGGATAATGAGAAGTTTCTAAACAAACTAAGAAATAGAATCGACAGGGTGGGAATTACACTTCCGAAAATTGAAGTTCGGTATGAAGATTTATTTGTGGAAGGAGATGTTCATGTTGGGGGTAGAGCACTTCCTACATTGTTCAATGTTTTGCTCAACATTGTTGAGGGTATTGTGGGAGTACTTCATCTTACATCATCCAACAAGACAGAAATTCAGATTCTTAAAAATGTCAGTGGAATCGTCAAACCATCAAGGATCACTTTACTTTTGGGTCCTCCAGCCTCAGGGAAAACAACATTACTTCTGGCACTGGCGGGGAAGCTTGACAATAATTTAAGGTCTTCTGGAAGAATCACATACTGTGGGCATGAGCTAAATGAATTTGTTCCTCAAAAAACATCTGCATATATTAGTCAACAAGACTTGCACATTGGAGAAATGACAGTGAAAGAAACATTAGATTTTTCAGGACGATGTCTTGGTGTTGGAAGTAGATATGACATGTTAGCTGAACTTACAAGAAGAGAAAGACAAGAAGGAATTAAGCCAGACCCTGAAATTGATGCATTTATGAAGGCTATTGCAATGTCAGGCCAAGAATCTAGTTTATCTACTGATTATATTCTCAAGATACTTGGATTGGATATTTGTGCGGACATTATGGTTGGTGATAGCATGAATAGGGGTATCTCTGGTGGACAAAAAAAGCGTGTGACAACAGGGGAGATGTTGGTTGGACCAGCAAAGGCACTCTTTATGGATGAAATATCAACAGGATTGGACAGCTCCACCACATATCAGATATGCAAGGTCATGAGACAAATGGTTCATATTATGGATATAACCATGGTGATTTCTCTTCTACAGCCAGCTCCAGAGACGTATGAACTATTTGATGACATTATCCTACTTTCGGAAGGTCAAACTGTATACCAAGGTCCGCGTGAGAATGTGCTAGAGTTTTTTGAACACATGGGTTTCAAATGTCCCGCGAGAAAAGGAGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTTTAGAGAAAATGAACCATACAGCTATGTTTCAGTTTCTGATTTTGTACATGCCTTTAGTTCTTTTAAAATAGGAGAGCAACTTGAGAAAGAGTTAAAGGTTCCCTATGACAAGGAACAAACCCACCCTGCTGCCTTAGTGAAAGACAAGTATGGTCTATCAAACTGGGAACTACTGCAGGCATGCTTTACAAGAGAAGTGTTGCTTATGAAGCGCGGCTCGTTTGTTTACATATTCAAGACTATACAGATAACACTCATGTCTATTGTCGCCCTCACTGTCTTCCTTAGAACTCAAAACCATCCGGGAACTTTTGATGGTGGACTGAAATACTTAGGAGGACTATTTTTCGCTGTAACAAATTTGATGTTTAATGGCATGGCAGAACAAGCCACGATTATTCAAAGTCTTCCTGTCTTTTACAAACAAAGGGACTTGTACTTTTTCCCTTCATGGGCATTTGCGCTACCTATATGGGTTCTCAGGATCCCTCTCTCCCTAATGGATGCAGCGATATGGATCATCTTTACATACTATGCAATTGGATATGCTCCTGCTGCTAGCAGATTCTTCAAACATCTCTTGGTACTATTTAGCATTCATCAGATGGCCGTCTCACTTTTTCGGTGCATAGCTGCACTTAGTAGAACACAAGTTATTGCCAATGTAGTATCTTTCTTAGGCTTTCAAATAATATTTGTACTTGGAGGTTTTATCATCTCAAGAGATGCTATTAAGAAATGGCTTTTATGGGGATATTATATGTCTCCTATGATGTATGGTCAGAATGCAATAGTAATAAATGAATTTTTAGATGAGAGATGGAGTCAACCAAATACAGATCCTAGAATTCATGCAACTACAATTGGAAAAGCAATTCTCAAGTCTAGAGGCTTCTATACACAAGGTTATTGGTATTGGATAGGAGTTGGAGCCTTGTTAGCCTTTGCATTTCTTTTCAACCTTCTCTTCATTGTTGCATTGAGTTATTTAAGTCCTTTGGGTGATTCAAAAACATCATTCATCATGGATGAAGATGAGAAGAAGAAGAATGAAAAGCCATCCGCTAGAAAAAAGGACACTCGAGGGAAATCAAAAATCAATGGTTCTTCTGATCAAGAATCAAGAACAGGAATTACTCTGCCATTTCAACCTCTTTCACTTACATTTAATCATATAAGCTACTATGTAGATATGCCTGCAGAAATGAAGAGTCAAGGAATCCCCGAAGATCGACTTCAGCTGCTTCAAGATGTTAGTGGTGCTTTCAGACCAGGTATATTGACAGCACTCATGGGTGTTAGTGGTGCTGGGAAGACAACTCTCATGGATGTATTAGCTGGAAGAAAAACAGGAGGGTACATTGAAGGAAGTATTAGCATCTCAGGCTATCCAAAGAAGCAAGAAACATTTGCTCGAATTAGCGGTTACTGTGAACAGACTGACATTCATTCTCCAAATGTTACAGTGTATGAATCACTATTATTCTCGGCTTGGCTTCGTCTTCCTGCAGATGTAAATAAGGAACAACGAAAGATGTTTGTCGATGAAGTTATGGAATTATTGGAGCTTAAGCCAATTGGAGAAACTTTAGTGGGTCTTCCAGGCACAGATGGTTTGTCAACAGAACAAAGGAAAAGGCTTACTATTGCTGTAGAATTGGTTGCAAACCCTTCAATCATCTTCATGGACGAACCAACATCTGGCCTTGATGCCAGAGCTGCTGCCATCGTTATGCGAACTGTGAGAAATACCGTGAACACAGGGAGAACTGTTGTCTGCACAATTCACCAGCCAAGCATAGACATTTTTGAAAGTTTTGACGAGGCAAGTTTGGACTCTAATGATCATAGTTTGTTAGTGTTAATGAAAAGAGGAGGTCAAATCAGCTATGCTGGACCTATTGGTCATCATTCACAAAAGCTTATAGAGTACTTCGAAGGTATTGCAGGGGTTGAAAAAATCACAGAAGGTTATAATCCTGCTACATGGATGCTTGAAGTTAGCACTCCTTTAATTGAGTCTCAACTCGATGTAGATTTTGCACAGATCTATGCTAACTCTGTCCAATACCAGAGGAATCAAGAACTTATCAAAGAGCTCAGTACTCCAGCACCAGATTCCAAGGACTTATTCTTCGCATCGGCATATGCCCAATCATCTTTTGTACAATGGAAAGCTTGTTTCTGGAAACTATATTGGTCCTATTGGAGAAATCCTCAGTATAATTTCACCCGGTACTGTTTGACAGTAATTATGGGACTAATATTTGGTGCAGTCTTTTGGAACAAAGGCACAAAGATACACGAACAACAAGATTTATTAAATATATTTGGAGGATTGTATGTTGCTGTGGTTTTCCTTGGATACATGAATGCTTCTGCAGTGCAACCAATTGTTGACATCGAAAGAACCGTTCTATATCGTGAAAAAGCGGCCGGAATGTATTCAGCATTTCCCTATGCAATTAGCCAGGTAGCAATTGAGGCACTTTATACCGTAATCCAAACAGTTCTTTACAGTCTTATCCTTTACTCCATGGTTGGTTTACAATGGAAGGCAGATAAATTCTTTTGGTTCTACTACTATATAACGACGTGTTTCATGTACTACACATTGTATGGTATGATGGCTATTGCATTAACTCCGGGTTACCAAATTGCCGCAATTTCTATGTCCTTCTTCATGACATTGTGGAACTTGTTTGCTGGCTTTACTATTCCAATGACACAAATTCCTATATGGTGGAGATGGTTCTATTGGATTTGTCCTGTTCCTTGGACATTCAATGGCATTATTACATCTCAATATGGTGACTTAGATTCAGAAATAATAATACCAGGAGCACCAAATATGAGATTCAAGGCTTTCCTTAAAGAAAGATTTGGTTTTCACCATGACTTCCTTCCAGTGATTGCTGTAGTTCATATAGTTTGGTGTATCCTCTTCTTGTGCGGCTTCGGCTTCGGCATTAAATTCTTGAACTTCCAGAAAAGATAG 4371 0.3894 MASSLSSFVGNDLERSRSRGLSFEEVWNNGGSDVFNVSRHSQNDDEENLKWAAIERLPTYDRMRKGVLKQMHDDGKIVHNEIDIGNLRFQDKKLLMDKILHLVEQDNEKFLNKLRNRIDRVGITLPKIEVRYEDLFVEGDVHVGGRALPTLFNVLLNIVEGIVGVLHLTSSNKTEIQILKNVSGIVKPSRITLLLGPPASGKTTLLLALAGKLDNNLRSSGRITYCGHELNEFVPQKTSAYISQQDLHIGEMTVKETLDFSGRCLGVGSRYDMLAELTRRERQEGIKPDPEIDAFMKAIAMSGQESSLSTDYILKILGLDICADIMVGDSMNRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTYQICKVMRQMVHIMDITMVISLLQPAPETYELFDDIILLSEGQTVYQGPRENVLEFFEHMGFKCPARKGVADFLQEVTSKKDQQQYWFRENEPYSYVSVSDFVHAFSSFKIGEQLEKELKVPYDKEQTHPAALVKDKYGLSNWELLQACFTREVLLMKRGSFVYIFKTIQITLMSIVALTVFLRTQNHPGTFDGGLKYLGGLFFAVTNLMFNGMAEQATIIQSLPVFYKQRDLYFFPSWAFALPIWVLRIPLSLMDAAIWIIFTYYAIGYAPAASRFFKHLLVLFSIHQMAVSLFRCIAALSRTQVIANVVSFLGFQIIFVLGGFIISRDAIKKWLLWGYYMSPMMYGQNAIVINEFLDERWSQPNTDPRIHATTIGKAILKSRGFYTQGYWYWIGVGALLAFAFLFNLLFIVALSYLSPLGDSKTSFIMDEDEKKKNEKPSARKKDTRGKSKINGSSDQESRTGITLPFQPLSLTFNHISYYVDMPAEMKSQGIPEDRLQLLQDVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQTDIHSPNVTVYESLLFSAWLRLPADVNKEQRKMFVDEVMELLELKPIGETLVGLPGTDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDEASLDSNDHSLLVLMKRGGQISYAGPIGHHSQKLIEYFEGIAGVEKITEGYNPATWMLEVSTPLIESQLDVDFAQIYANSVQYQRNQELIKELSTPAPDSKDLFFASAYAQSSFVQWKACFWKLYWSYWRNPQYNFTRYCLTVIMGLIFGAVFWNKGTKIHEQQDLLNIFGGLYVAVVFLGYMNASAVQPIVDIERTVLYREKAAGMYSAFPYAISQVAIEALYTVIQTVLYSLILYSMVGLQWKADKFFWFYYYITTCFMYYTLYGMMAIALTPGYQIAAISMSFFMTLWNLFAGFTIPMTQIPIWWRWFYWICPVPWTFNGIITSQYGDLDSEIIIPGAPNMRFKAFLKERFGFHHDFLPVIAVVHIVWCILFLCGFGFGIKFLNFQKR 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1212 1456 Pfam Plant PDR ABC transporter associated 732 796 IPR013581 -
Lal11g1212 1456 Pfam ABC transporter 179 361 IPR003439 GO:0005524
Lal11g1212 1456 Pfam ABC transporter 873 1025 IPR003439 GO:0005524
Lal11g1212 1456 Pfam ABC-transporter N-terminal 103 154 IPR029481 -
Lal11g1212 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 449 IPR027417 -
Lal11g1212 1456 Pfam ABC-2 type transporter 394 446 IPR043926 GO:0140359
Lal11g1212 1456 Gene3D - 859 1098 IPR027417 -
Lal11g1212 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 845 1108 IPR003439 GO:0005524
Lal11g1212 1456 PANTHER ATP-BINDING CASSETTE TRANSPORTER 21 1456 - -
Lal11g1212 1456 CDD ABCG_PDR_domain2 842 1090 IPR034003 -
Lal11g1212 1456 Gene3D - 166 470 IPR027417 -
Lal11g1212 1456 MobiDBLite consensus disorder prediction 802 835 - -
Lal11g1212 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 436 IPR003439 GO:0005524
Lal11g1212 1456 MobiDBLite consensus disorder prediction 802 826 - -
Lal11g1212 1456 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 21 1456 - -
Lal11g1212 1456 Pfam ABC-2 type transporter 1181 1393 IPR013525 GO:0016020|GO:0140359
Lal11g1212 1456 Pfam ABC-2 type transporter 515 727 IPR013525 GO:0016020|GO:0140359
Lal11g1212 1456 SMART AAA_5 882 1073 IPR003593 -
Lal11g1212 1456 SMART AAA_5 188 414 IPR003593 -
Lal11g1212 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 868 1058 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1212 Lal-Chr11 15871407 15879108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1212 870 1057 Calmodulin-binding Proteins AT2G36910 26.042 5.38e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1212 K08711 - gmx:100786482 2109.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1212 11 15871407 15879108 Lal11g1212 11 15871407 15879108 ECH
Lal11g1212 11 15871407 15879108 Lal20g0145 20 964461 974519 LSH