Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1207 ATGGGGAGTTATTTCAGCTTGGAACAGTGGCAGGAACTGGAATTGCAGGCATTGATATTCAGGTACATGTTGGCTGGTGCTGTTGTTCCTCATGAACTTCTTCAACCAATCAAGAAAAATATTCTTCATTCTCCTACTTCTCCTTATTTCATCCATCAACATTATCTTCAACATTATCAATCTACTGCATCATTGTTGCAACCAGGATACTGGGGAAGAGGGGCGATGGATCCGGAACCGGGACGTTGCCGGAGGACGGACGGGAAGAAGTGGCGGTGCTCGAGAGACATGGTGGCGGGTCATAAGTACTGTGAGAGACACATGCATCGTGGTAAAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAACCACCATTAATGAACAATGGTAA 396 0.4621 MGSYFSLEQWQELELQALIFRYMLAGAVVPHELLQPIKKNILHSPTSPYFIHQHYLQHYQSTASLLQPGYWGRGAMDPEPGRCRRTDGKKWRCSRDMVAGHKYCERHMHRGKNRSRKPVELPTPTTINEQW 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1207 131 Pfam QLQ 5 37 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal11g1207 131 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Lal11g1207 131 Pfam WRC 78 120 IPR014977 -
Lal11g1207 131 PANTHER - 2 126 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal11g1207 131 PANTHER GROWTH-REGULATING FACTOR 3 2 126 - -
Lal11g1207 131 SMART QLQ_2 3 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal11g1207 131 MobiDBLite consensus disorder prediction 109 131 - -
Lal11g1207 131 ProSiteProfiles QLQ domain profile. 4 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1207 Lal-Chr11 15837423 15838777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1207 1 128 GRF Transcription Factor Family AT2G36400 73.846 1.33e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal11g1207 WRC 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1207 - - gmx:100814842 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1207 11 15837423 15838777 Lal11g1207 11 15837423 15838777 ECH
Lal11g1207 11 15837423 15838777 Lal20g0142 20 945845 949142 LSH