Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1204 ATGATGGCTCAGAAATACTTACATGAGTTACTTGAGGAGGATCAAGAACCGTTCCTTCTAAACAAGTACATTTCCGAAAAACGTAGCCAAATCAAAACTCAAATTTCCCCACGAAAAAAACACAAACCACTTCAACATAACTCAAATTTCCCCACGAATCTATGCAAAAACGTTTGTCTTTTCTCATTTCCAGATACAACAACCCCAGACCTAAGAAAATCTCCACTCTTCGAATTTCAATCACCTTCTGCAACAAAAACCAAAAGCCCCATCAAGTTCCATATCCATTCTCGAACCGCGAATCTTCTTCTCGAAGCAGCTCTTAAGATTCAAAAGCACTCTTCCAAACCCAAAATCCAAAACAAAAGCAATGGCTTTGGGCTATTGGGGTCTTTGTTCAAGAGACTAACACATCGAAACCAGAAAAGGAAGGAAATTGTGGGTAGTCATGTAAATTTGTCTGTGAAGGATATTTTGAAGTGGGAATCTAGAAAAATCTCAAATGGGTGCATCAAAGAGCAAGAAAAATTGGATTTTTGCAATGGAAGAAGGAGTGCTGTTTGGTCAGAGAGTAATGAAGATAAATCTTTGGACATGGAAACATCGAGTAGCAGCAGTAGTAGGCATTGTGATGATGATTCTGAGTCACAAGAGATTGATTTTGTAACAAATCAGAAACATGATATAGAGTGTCCTTGCTGTTATGATATCAATGCCTTCTGTAATAGCCCTTTCCGTTTTGTTCTTCAGAGAAGCCCTTCTTCCGGCTGCCACACACCGGAGCTACCATCGCCGGCACAGTCACCGGGCCGCCACATAAAAGAGGACAAAGAAAGTAATGGAGGAGAAGAAGAGGAAGAGGATAAGGAACAGTGTAGTCCAGTGTGTGTTTTGGATCCACCCTTCGAGGATGATGATGAAGGGCATGTAAACGATGACGAAGAAGATGATGAAGAAGATAGTTCTGATTTGAGGTGCAGCTATGCCATTATGCAAAGAGCTAAGCAACAATTATTGTACAAGCTTCATAGATTTGAGAAACTTGCAGAGTTAGATCCAGTAGAACTTGAGAAAAGAATGTCGGAGGACGAAAATGAAGCATTTACCGAAAAGGACGACGATCGTGAAGATCACGAAGCATCATATAAAGAAAATGAGTTTATAGAACTAGTTTTTGAATCTCTATGCCATTTAAGTGTCCATGAAAAAGGTCAAATTCCAGAAGATCTTAAGAAACTTGTTTCTGATCTAATTGTGGAGGAAGATAGAGAACTTAATTCCTTAGAAGAGAAGGATATAGTGATAAGAAGGGTATGCAAGAAGCTAGAATTATGGAAAGAAGTGGAGTTTAACACAATTGATATGATGATAGAAGAGGACTTCACTAGAGAGAATGGAGAGTGGAAGAAAAATATGGTGCAAGTAAAAGAGATGGTTGGTGAGGTTGAACTTGCTATTTTTGGCTTTCTAGTGGATGAATTTTCAGAGGAAGTACTAGTATGTTAA 1506 0.3898 MMAQKYLHELLEEDQEPFLLNKYISEKRSQIKTQISPRKKHKPLQHNSNFPTNLCKNVCLFSFPDTTTPDLRKSPLFEFQSPSATKTKSPIKFHIHSRTANLLLEAALKIQKHSSKPKIQNKSNGFGLLGSLFKRLTHRNQKRKEIVGSHVNLSVKDILKWESRKISNGCIKEQEKLDFCNGRRSAVWSESNEDKSLDMETSSSSSSRHCDDDSESQEIDFVTNQKHDIECPCCYDINAFCNSPFRFVLQRSPSSGCHTPELPSPAQSPGRHIKEDKESNGGEEEEEDKEQCSPVCVLDPPFEDDDEGHVNDDEEDDEEDSSDLRCSYAIMQRAKQQLLYKLHRFEKLAELDPVELEKRMSEDENEAFTEKDDDREDHEASYKENEFIELVFESLCHLSVHEKGQIPEDLKKLVSDLIVEEDRELNSLEEKDIVIRRVCKKLELWKEVEFNTIDMMIEEDFTRENGEWKKNMVQVKEMVGEVELAIFGFLVDEFSEEVLVC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1204 501 Coils Coil 411 431 - -
Lal11g1204 501 MobiDBLite consensus disorder prediction 305 322 - -
Lal11g1204 501 MobiDBLite consensus disorder prediction 190 214 - -
Lal11g1204 501 PANTHER OS04G0572500 PROTEIN 1 499 - -
Lal11g1204 501 MobiDBLite consensus disorder prediction 254 323 - -
Lal11g1204 501 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 499 - -
Lal11g1204 501 MobiDBLite consensus disorder prediction 358 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1204 Lal-Chr11 15799433 15804168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1204 1 303 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.595 6.19e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1204 - - gmx:100790018 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1204 11 15799433 15804168 Lal11g1204 11 15799433 15804168 ECH
Lal11g1204 11 15799433 15804168 Lal1g1770 1 20066950 20075117 LSH
Lal11g1204 11 15799433 15804168 Lal13g1414 13 13549759 13553673 PCT
Lal13g1414 13 13549759 13553673 Lal11g1204 11 15799433 15804168 PCT