Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1192 ATGGAAATGAAAGACATCACTGTTTCTTCTTCACCATTGAGCACTTCTTTGCTACCCCAAATGATGAACCTGAACATGAATAACACTCTAGCAACAACAACACTACCACAACCAGAACCAGCAACAGCAATAACTATAGCCACAACAAAAACAACAGTACCAGAACCAGAAACAACAAAAGCTATAACCACAATAACAACAACAGTACCAGGTAGTGTTGTTGATTCACTTGGGAAGAAGAAAAGAGGGAGGCCTAGGAAATATGACTCAGAAGGAAACTTAAGGGTGAGTTCAAAACCACAACAAGGTTTTTCTATGTCTCTAACATCACCACCTTCTTCATCAAAAAGGGGTAGAGGAAAACCATTTGGTTTTAACAACTTTCATCTACTTGGTTCTTCTACAGGGTTGTTTGGATGCACGGCTGGTCGGGATTTTACGCCTCATGTAGTGACTATTCACACCGGAGAGGATGTTGCTGCAAAGATCTTCTCATTTGTCCAGAGGGGTCCTGTAGGAGTATGCATTCTTTCTGCCAATGGAGCTATCTCTAAAGTTACCTTACGCCAACCCGGACCAGATCGCATGGTCCAACCGCAGTTCGGCCGTGAAGATGGCTCTGTTTTGTCTAGAAAACTGGATATTGTTGCACCCCCTGGCCGATTTGAGATTTTATCCTTGTCTGGGTCATTCACCGTCTCTGACAATGGTAGTATAAGTCCGACTAACATACTGAGTGTCTCACTGGCTGGCCCCGATGGTCGCGTGATTGGAGGTGGTGTTGCTGGTTTATTGACAGCAGCTTGCCCAATTCAAGTTGTAATAGGAAGCTTCATGCCAAATGGTTACAAGACTCAAAAAAGAAAATACAACCGAGAACATTCCTCGGGTGCTAAATTTTGTGCCGCCGATATAGTGACAGCACCATCACCAAGACCTATATCACAACAAAATTCTGATGCTACACTTATTGCTGCTGATTGGAATGGTAGTGGAGAGTTTTCAGATCATGGGCCATCTCCAGATATCAACATATCTTTGAATGATGATTAG 1053 0.4321 MEMKDITVSSSPLSTSLLPQMMNLNMNNTLATTTLPQPEPATAITIATTKTTVPEPETTKAITTITTTVPGSVVDSLGKKKRGRPRKYDSEGNLRVSSKPQQGFSMSLTSPPSSSKRGRGKPFGFNNFHLLGSSTGLFGCTAGRDFTPHVVTIHTGEDVAAKIFSFVQRGPVGVCILSANGAISKVTLRQPGPDRMVQPQFGREDGSVLSRKLDIVAPPGRFEILSLSGSFTVSDNGSISPTNILSVSLAGPDGRVIGGGVAGLLTAACPIQVVIGSFMPNGYKTQKRKYNREHSSGAKFCAADIVTAPSPRPISQQNSDATLIAADWNGSGEFSDHGPSPDINISLNDD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1192 350 MobiDBLite consensus disorder prediction 94 116 - -
Lal11g1192 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 278 IPR005175 -
Lal11g1192 350 CDD DUF296 147 278 IPR005175 -
Lal11g1192 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 27 321 IPR039605 GO:0003680
Lal11g1192 350 MobiDBLite consensus disorder prediction 72 121 - -
Lal11g1192 350 MobiDBLite consensus disorder prediction 77 93 - -
Lal11g1192 350 Gene3D - 148 296 - -
Lal11g1192 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 284 - -
Lal11g1192 350 ProSiteProfiles PPC domain profile profile. 143 304 IPR005175 -
Lal11g1192 350 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 27 321 - -
Lal11g1192 350 MobiDBLite consensus disorder prediction 328 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1192 Lal-Chr11 15680607 15684380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1192 77 293 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 45.923 3.89e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1192 - - lang:109337576 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1192 11 15680607 15684380 Lal11g1192 11 15680607 15684380 ECH