Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1190 ATGGGTGACTGGGTACCGGGATATCTTTTTGAGAAGTCGGTTTGGCCCAGTGTAACTTCTGTTGAGAAGTCGGTTTGGGCCAGAGCAACTTCTGTTGAGAAGTCGGTTTGGCCCAGTGTAACTTCAGTTGAGAAGTCGGTTTGGGCCAGAGCAACTTCTGTTGAGAAGTCGGTTTGGCCCAGTGTAACTTCTGTTGAGAAGTCGGTTTGGGCCAGAGCAACTTCTGTTGAGAAGTCGGTTTGGCCCAGTATAACTTCAGTTGAGAAGTCGGGTTTACTCGCAGAAGATACAACAGAAGAAGAAGAAGACGTAGCAGCCATGGTTCTCAAGACTGAACTCTGCCGATTCAGCGGTGCCAAGATCTACCCAGGGCGAGGCATCAGATTCATTCGTGGCGATTCACAGGTTTTCCTATTTGTAAACTCAAAATGCAAGAGGTACTTCCACAATCGTTTGAAGCCATCAAAGCTCACCTGGACTGCCATGTTTAGGAAGCAACACAAGAAGGACGCTGCTCAAGAAGCTGTGAAGAAGAAGCGCCGTGCTACTAAGAAGCCATACTCCAGATCCATTGTTGGTGCTACTTTGGAAGTTATTCAGAAAAGAAGAACTGAGAAGCCTGAAGTTCGAGATGCTGCCAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACAAAGGATGAGAAGAAGGCTAAAAAGGCAGAAGTAACTGCCAAGTCACAAAAGTCAGGCAAGGGTAATGTTTCAAAGGGTGCAGCACCAAAGGGTCCCAAGCTTGGTGGTGGTGGTGGGAAACGTTAA 810 0.4741 MGDWVPGYLFEKSVWPSVTSVEKSVWARATSVEKSVWPSVTSVEKSVWARATSVEKSVWPSVTSVEKSVWARATSVEKSVWPSITSVEKSGLLAEDTTEEEEDVAAMVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTAKSQKSGKGNVSKGAAPKGPKLGGGGGKR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1190 269 PANTHER 60S RIBOSOMAL PROTEIN L24 103 269 IPR000988 -
Lal11g1190 269 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 112 164 - -
Lal11g1190 269 SMART 4TRASH 114 152 IPR011017 -
Lal11g1190 269 PANTHER 60S RIBOSOMAL PROTEIN L24 103 269 - -
Lal11g1190 269 Coils Coil 218 242 - -
Lal11g1190 269 ProSitePatterns Ribosomal protein L24e signature. 116 133 IPR023442 -
Lal11g1190 269 Gene3D Ribosomal protein L24e 109 170 IPR038630 -
Lal11g1190 269 MobiDBLite consensus disorder prediction 223 269 - -
Lal11g1190 269 MobiDBLite consensus disorder prediction 223 242 - -
Lal11g1190 269 CDD Ribosomal_L24e_L24 109 162 IPR000988 -
Lal11g1190 269 Pfam Ribosomal protein L24e 110 173 IPR000988 -
Lal11g1190 269 Gene3D - 175 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1190 Lal-Chr11 15659939 15663128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1190 107 262 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 3.33e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1190 K02896 - thj:104826938 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1190 11 15659939 15663128 Lal11g1190 11 15659939 15663128 ECH
Lal11g1190 11 15659939 15663128 Lal1g1783 1 20196386 20198313 LSH