Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1188 ATGAAACAACACTTCCATTTGAGCTATGCCTTTCTTATTTTCCTTGTTCATCATCATTATGCTTTTTCACAGAAAACTTGCCCTAACTGTGGCTCTATACAAGTTCCATACCCTTTGAGCACAGAACCAAATTGTGGTGATCCAAACTATGCTCTTCACTGTGATCAACACTCTCAAAAACTTTACCTTGACACCCTCAATGGAAGTTCCTATATGGTTCAAAAAATAATGTCTTCAACTCAACGTTTAGTGATTCAACCATCACCTTGGTTACAACAAAGTACTACTACTACTACAACTACTACTAGTAGTTTATGTGTTACACAAGACATGCCTATAAGCAATGGTCTTTGGTTAAATCAATCACTGCCTTTCAAGATAACTTCATCAAACACAGTGTTTCTACTTAACTGTTCTCCAAGACTATTGGTTTCTCCACTGAATTGCACTTCTTCTAGTCTTTGCCATCTTTACTTAGAGAGTTCAGGTCATGTTGAAACAAAAAGAGCACTAGATTGTGCAAGTGGTCTTATTCACCCTTGTTGCACTTTTGTTGCTGGTGGTGTACCTTCATCTTACAAGATTAGGCTTCATAGTTCTGGTTGTAAAGCATTCAGAAGCATCATTCATTTGGATGAATATAAGCCTCCAAATCAGTGGGAAGAAGGCCTTGAAATTCAATGGGATCCTCCACAGGAACCAATCTGCAACACACAAATGGATTGTTCTGAAGACTCTAAGTGTTCCACTTATGGTAGATGTCTTTGTAATAAGGGACACCATTGGGACCCTTTTGTAGCCACTTGCTTGAGGTACAAGAAAAAACCCAAATGGAAAACCAACTTGGTTATTGTCTCAATAGGAGTTGTTACTTTTTTGTCTCTAGCTTTAGTTCTAGCCATCAAAACTAGGTCTTGTAAAGTCTCTAGTTATGGGGTGAAGCATGAGAAAGAAAGAGAAGAACATGTGCTGAAATCAAGAGATGGAGAGAAACCTTGTAGGATGTTTCAACTGAAAGAAATGAAGAAAGCAACAAATGATTTTTCTCAAAAGAGATTGTTAGGGAGTGGTGGCTTTGGTGAAGTTTACAAAGGTGAACTCCAAGATGGAACTATAGTAGCTGTCAAAAAAGCTAAAGTTGGTAACTTGAAAAGCACTCAACAAGTGCTTAATGAGGTTGAAATTCTTTCTCAAGTTAATCACAAAAACCTAGTAAGACTCTTAGGTTGTTGTGTAGAATCTGAGCAACCACTTATGGTGTATGAATATATCTCAAATGGGACCTTCTATGACCATATTCATGCTATAAGGTATTCCAATAATTTCCTAGACTTGAAAACAAGGTTAAAAGTTGCTTTTCAAACTGCTGAAGCTTTAGCTTATTTGCATTCTTCAGCACATACTCCTATTTATCATAGGGATGTTAAATCCACAAACATATTACTAGATGATGAATTTAATGCCAAAGTCTCAGATTTTGGACTTTCAAGATTGGCTAACCCTGGACTAAGTCATGTATCAACATGTGCTCAAGGAACACTAGGGTACTTAGATCCTGAATATTATAGAAACTATCAATTAACTGATAAAAGTGATGTTTATAGTTATGGTGTTGTGTTGCTTGAGCTTTTAACTTCAAAGAAAGTTATAGACTTTTCTAGGGACCAAGATGATGTTAATCTAGCAATTCATGTTACCCAACATGCAAGTAATGGTTCAATCATGGAAGTGGTGGATCAAAGGTTTTTTTCTTTGGAGAGTGATAAAAATATGATCACAAGTATAACACTATTGTTGGAGATTGCACTTGATTGCTTGAGGGAGAAGAAAGGTGAAAGACCTAGCATGAAGGATATTGTTCAAAGGCTCCTATGCATAATTAGGATAGTAGATCAATGA 1899 0.3655 MKQHFHLSYAFLIFLVHHHYAFSQKTCPNCGSIQVPYPLSTEPNCGDPNYALHCDQHSQKLYLDTLNGSSYMVQKIMSSTQRLVIQPSPWLQQSTTTTTTTTSSLCVTQDMPISNGLWLNQSLPFKITSSNTVFLLNCSPRLLVSPLNCTSSSLCHLYLESSGHVETKRALDCASGLIHPCCTFVAGGVPSSYKIRLHSSGCKAFRSIIHLDEYKPPNQWEEGLEIQWDPPQEPICNTQMDCSEDSKCSTYGRCLCNKGHHWDPFVATCLRYKKKPKWKTNLVIVSIGVVTFLSLALVLAIKTRSCKVSSYGVKHEKEREEHVLKSRDGEKPCRMFQLKEMKKATNDFSQKRLLGSGGFGEVYKGELQDGTIVAVKKAKVGNLKSTQQVLNEVEILSQVNHKNLVRLLGCCVESEQPLMVYEYISNGTFYDHIHAIRYSNNFLDLKTRLKVAFQTAEALAYLHSSAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSKKVIDFSRDQDDVNLAIHVTQHASNGSIMEVVDQRFFSLESDKNMITSITLLLEIALDCLREKKGERPSMKDIVQRLLCIIRIVDQ 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1188 632 SUPERFAMILY Protein kinase-like (PK-like) 331 623 IPR011009 -
Lal11g1188 632 Gene3D Phosphorylase Kinase; domain 1 307 423 - -
Lal11g1188 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Lal11g1188 632 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1188 632 Pfam Wall-associated receptor kinase galacturonan-binding 27 85 IPR025287 GO:0030247
Lal11g1188 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 632 IPR045274 GO:0007166
Lal11g1188 632 CDD STKc_IRAK 354 623 - -
Lal11g1188 632 SMART serkin_6 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1188 632 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Lal11g1188 632 Pfam Protein kinase domain 349 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1188 632 Gene3D Transferase(Phosphotransferase) domain 1 424 627 - -
Lal11g1188 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 19 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1188 Lal-Chr11 15648220 15650118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1188 27 632 Receptor kinase-like Gene Family AT5G02070 46.057 2.05e-177 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal11g1188 Pkinase 4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1188 - - gmx:100804678 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1188 11 15648220 15650118 Lal11g1188 11 15648220 15650118 ECH