Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1146 ATGGGGAGGAAAGGAAATTGGTTTTCGAGTGTGAAGAAAGTTCTCAGTCATGACTCAAAGGAGAAGAAAGATCAGAAATCGAGTAAATCTAAGAAGAAATGGTTTGGGAAGAAAAAATTGGAGACCTTAGGTTCATTCTCAGGAACTGATAAAGCATCACATCTTCCTCCACCGGATGAGATTAAATTAACTCAGCATGAAAATGAAAACATTCATGATAATGTTGTTGAAGTTGCAACAACCATGGTTGCTGAGGATCCTGTTCTAGTTCCTGCTGTTCAAACAATAGCTGCTGCTGTTGAAGGTGCTAGAATTGATCGATTTGCCGGTAAACCAAGGGACGAGGTAGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGCTAGTGAGGTTGAAATCATTGATGGCAGATCCCGTTATAAAACGTCAAGCCACAAGTACCCTCCGCTCGATGCAGACATTATCACGCATGCAATCACAGATTCGTTCTAGGAGGATCAGAATGTTAGAAGAGAATCAGGCTCTTCAGAGACAGCTCTTACAGAGGAATGCGAACGAGCTTGAGAGTATGCGGATTGGAGAGGAATGGGATGATAGCTTACAATCTAAAGAACAAATTGAAGCCAAATTGCTAAGCAAGTACGAGGCTGCTATGAGAAGAGAAAGAGCGCTAGCTTATGCATTCACTCGTCAGCAAAATGGGAAGAATACATGTAGATCTATAAATCCAATGTTCACCGATCCAACCAATCCTAGTTGGGGTTGGAGCTGGTTGGAACGACGGATGGCAGCGCGGACTTTGGAGGCCAATAGCATTACTGGTGCGGAAATCAGCAAATCATTTGCACGTTTCCAGCTCAACTTTGAAAAGCATTCTCCAAGAGCCAGCCAAAATCATGTCCCACCCAACTTTCAGTCCCATCCAACTTCTTCCAAGCCACCTTTTTCGTCAGTTGTTGATATGAAACCGAAGAAGGCAAGCTCAAAGGAAAGTTCGGTTATGGATGATGACTCCAAAAGCATGGTCAGTGTACAGTCAGACCTGTTCCGGAGGCACTCCATCCCGAGTTCATCAGTGAAAGATAAGGAGAGCCTTGCTACCTCTCCGTCCGTTCCAAGTTACATGGTGCCAACTCATTCTGCAAAAGCTAAGTCCAGGACACAAAGTCCTTTAGCCACAGAAACTGGTCAAGCAGAGAAAGGATCCTTTGGGACTGCAACGAAACGGCTTTCTTATCCGGCTTCACCTGCCAAGCAAAGAAGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTAGATGCAGAATTCACTATGAGCAATGGTGTGGCCAATTGA 1371 0.4464 MGRKGNWFSSVKKVLSHDSKEKKDQKSSKSKKKWFGKKKLETLGSFSGTDKASHLPPPDEIKLTQHENENIHDNVVEVATTMVAEDPVLVPAVQTIAAAVEGARIDRFAGKPRDEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMADPVIKRQATSTLRSMQTLSRMQSQIRSRRIRMLEENQALQRQLLQRNANELESMRIGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTRQQNGKNTCRSINPMFTDPTNPSWGWSWLERRMAARTLEANSITGAEISKSFARFQLNFEKHSPRASQNHVPPNFQSHPTSSKPPFSSVVDMKPKKASSKESSVMDDDSKSMVSVQSDLFRRHSIPSSSVKDKESLATSPSVPSYMVPTHSAKAKSRTQSPLATETGQAEKGSFGTATKRLSYPASPAKQRRHSGPPKVESSLDAEFTMSNGVAN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1146 456 PANTHER IQ-DOMAIN 5-RELATED 281 450 - -
Lal11g1146 456 PANTHER IQ-DOMAIN 5-RELATED 1 285 - -
Lal11g1146 456 Gene3D - 97 141 - -
Lal11g1146 456 Pfam Protein of unknown function (DUF4005) 373 436 IPR025064 -
Lal11g1146 456 MobiDBLite consensus disorder prediction 304 456 - -
Lal11g1146 456 MobiDBLite consensus disorder prediction 304 328 - -
Lal11g1146 456 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Lal11g1146 456 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Lal11g1146 456 MobiDBLite consensus disorder prediction 349 416 - -
Lal11g1146 456 MobiDBLite consensus disorder prediction 1 33 - -
Lal11g1146 456 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 281 450 - -
Lal11g1146 456 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 285 - -
Lal11g1146 456 SMART iq_5 113 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1146 Lal-Chr11 15173882 15177489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1146 1 455 IQD Protein Family AT5G03040 47.780 3.44e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1146 - - gmx:100800080 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1146 11 15173882 15177489 Lal11g1146 11 15173882 15177489 ECH
Lal11g1146 11 15173882 15177489 Lal1g1828 1 20607535 20611714 LSH
Lal11g1146 11 15173882 15177489 Lal20g0082 20 536142 540096 LSH
Lal11g1146 11 15173882 15177489 Lal12g0933 12 7857020 7861919 PCT
Lal11g1146 11 15173882 15177489 Lal24g0862 24 7006378 7012489 PCT
Lal12g0933 12 7857020 7861919 Lal11g1146 11 15173882 15177489 PCT
Lal24g0862 24 7006378 7012489 Lal11g1146 11 15173882 15177489 PCT