Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1140 ATGCACAGAGCTTCAGATGAAAGGCCGCAGAGTATCGAATACGGATCCACATCCATGGATCCACTAGGATTACTTGAAATTATGGATATTTACTTTCCTCATCAATTGTTCACAATCGAACAAACTTGGCTCAATCTCTCTTCTGCTCTATTTTCATTATTTTCTTCTCCGATCGGCGAAGACCTCACTTCTCAGGTAAAAAGTGATTATGGAAACTTTGTCTTGTCCCTTGACTTTCAGCAGCTCAAAAGAATATGTCATATTGAGGAACTTTATGAAATGTTAGAGGGGAAACCTAAAATTGCACTCTTATGCATGAGTGTTGCAGTTCACAAGGCTTTGCTTTCTAAAACGGAGAATGAAAAGCTGGAGCTTGGTGCGAAAGTAGATATACGTATTCATAACTGTCCTGAAACCATGATTGCTCTGAAGAACTTAAAAGCAGCTTACATTGACATTATAACATCCTCTGGTGACTTGACAGACAAGCTTGTCTCCGTGCGTGGTACTGCTGTGAAAGTCAGTACTGTCAGGCCCCTTGTGGTAGCAATGAGTTTTGAATGCATCAAGTGTAAACAACCAATTATGCGAATATTTCCTGATGGAAAGTTTTCACCACCTTCAACTTGCAATTTGAATGGATGCAAGAGCAGAATCTTTAATCCATTACGATCTACTGCTCAAATAATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAACCTGAAGATCATGAAGAAGGACGGATGCCTCGAACAGTGGAATGTGAACTTACTCAAGATCTTGTTGACGCATGCATACCTGGAGATGTGGTGACTGTCACTGGAATTATACGAGGAATTAACACTTACATGGATATTGGAGGAGGGAGGTCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTTGAAGCTGTATCCGTGAAAAATTCGAAGTCACAGTCCACATCTGAGGAGTTGCAAGACTCAAATCCCACAGCTAGACCGACTGAGCTGTTTGATTTGTTTACATTTTCTTCAAAGGATCTAGAATTTGTGGTGAAGTTTTCAGAAGAGCATGGTTCAGACTTATTTCGGCAAATCCTTCAATCTATATGCCCATCCATCTATGGACATGAGCTTGTCAAAGCTGGGATAACTCTGGCATTATTTGGCGGTGTGCGAAAACATTCCATGGATCAGAATAAGGTTCCTGTGAGGGGAGACATTCATGTTATAATTGTCGGTGATCCTGGTTTGGGTAAGAGCCAGTTGCTACAAGCAGCAGCAGCTGTTTCTCCGCGTGGTATCTATGTCTGTGGTAATGCCACAACCAAAGCTGGCCTCACTGTAGCTGTTGTGAAGGATCCCATGACAAGTGACTATGCTTTTGAGGCTGGTGCTATGGTTTTGGCTGATAGTGGATTGTGCTGTATTGACGAGTTTGATAAAATGTCATCAGAACATCAGGCTTTGCTGGAGGCAATGGAGCAACAGTGTGTCTCTATTGCAAAGGCAGGATTAGTAGCAAGTTTATCATCTCGGACTTCTGTTTTGGCGGCTGCAAACCCTGTTGGTGGTCATTATAACCGGGCAAAAACTGTAAACGAAAATTTGAAAATGAGTGCTGCTCTCCTGTCCCGTTTTGATTTAATTTTCATACTGCTGGACAAACCTGATGAACTTCTGGACAAGCGTCTTTCAGAGCACATTATGTCACTTCATGCTGGCTCTGGACAACATTCACCAGCATTGAAAAAACGACGTGAAAGTATATCTCTCCGATTCCTGTTGGGTGATTTTTCAGATCCACCTTCAGATTCAAGAACTACTTTATCACAGAATGTTGAGGGTGTAGATTTGCATGTTAGATCTGGTTCTTTAGTTTCGAGGTTAAGACTTGATCCTCGAAGGGATAGAGATTTTGTTCCATTACCCGGTCAACTTCTTCGCAAATACATTGCTTATGCAAGGAGTTATGTCTTTCCTAGGATGTCCAAGCCAGCAGCAGAAATCCTACAAAAGTTTTACCTTAAATTGAGAGATCATAATACTTCGGCAGATGGTACTCCAATAACAGCAAGGCAACTGGAAAGTCTTGTAAGGCTGGCTGAAGCTCGAGCAAGGCTGGATTTGAGAGCAGATATAACGGCCCAGGATGCAATGGATGTTGTCGAAATCATGAAGGAATCTCTGTATGACAAATATGTTGATGAGCATGGTGTTGTAGATTTTGGTCGAAGTGGGGGGATGAGTCAACAGAAAGAGGCAAAACGCTTCTTAAATGCCCTCAATAAACAATCCGAACTTGAACAAAAAGATTGCTTTTTAGTATCTGAAATATACAGTTTGGCAGATAGGATTGGCTTGAAAGTTCCTGATATTGACACTTTCATAGATAATTTAAACAGCGCTGGTTATCTACTCAAAAAAGGTTCAAAGACATACCAGGTGTTATCCTCTTCTTATTCACGAAGCCAATCATTCAGGTCAAGGAGCTAA 2487 0.4089 MHRASDERPQSIEYGSTSMDPLGLLEIMDIYFPHQLFTIEQTWLNLSSALFSLFSSPIGEDLTSQVKSDYGNFVLSLDFQQLKRICHIEELYEMLEGKPKIALLCMSVAVHKALLSKTENEKLELGAKVDIRIHNCPETMIALKNLKAAYIDIITSSGDLTDKLVSVRGTAVKVSTVRPLVVAMSFECIKCKQPIMRIFPDGKFSPPSTCNLNGCKSRIFNPLRSTAQIIDFQKIRVQELLKPEDHEEGRMPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGRSKNRNQGFYYLYLEAVSVKNSKSQSTSEELQDSNPTARPTELFDLFTFSSKDLEFVVKFSEEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMSLHAGSGQHSPALKKRRESISLRFLLGDFSDPPSDSRTTLSQNVEGVDLHVRSGSLVSRLRLDPRRDRDFVPLPGQLLRKYIAYARSYVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLRADITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFLVSEIYSLADRIGLKVPDIDTFIDNLNSAGYLLKKGSKTYQVLSSSYSRSQSFRSRS 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1140 828 Gene3D - 180 230 - -
Lal11g1140 828 Gene3D - 161 282 IPR012340 -
Lal11g1140 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 733 IPR027417 -
Lal11g1140 828 ProSiteProfiles MCM family domain profile. 359 566 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 22 823 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 PANTHER DNA HELICASE MCM8 22 823 - -
Lal11g1140 828 SMART AAA_5 403 555 IPR003593 -
Lal11g1140 828 Pfam MCM OB domain 161 281 IPR033762 -
Lal11g1140 828 Coils Coil 474 494 - -
Lal11g1140 828 Pfam MCM AAA-lid domain 644 727 IPR041562 -
Lal11g1140 828 CDD MCM8 363 726 - -
Lal11g1140 828 Pfam MCM P-loop domain 357 570 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 SMART mcm 149 728 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 SUPERFAMILY Nucleic acid-binding proteins 71 283 IPR012340 -
Lal11g1140 828 PRINTS Mini-chromosome maintenance (MCM) protein family signature 402 417 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 PRINTS Mini-chromosome maintenance (MCM) protein family signature 462 476 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 PRINTS Mini-chromosome maintenance (MCM) protein family signature 489 502 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 PRINTS Mini-chromosome maintenance (MCM) protein family signature 513 525 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 PRINTS Mini-chromosome maintenance (MCM) protein family signature 540 548 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal11g1140 828 Gene3D - 337 737 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1140 Lal-Chr11 15128699 15137234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1140 16 814 Core DNA Replication Machinery Family AT3G09660 69.663 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1140 K10737 - gmx:100784549 1293.1