Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1131 ATGGTTATGAATTCTGAGAATTCCGATCGTGAAATCTTCAAGGCTTGGGCGAAAGACGTTGCGGAATGTGAAGAACACTTCAAGGTGAGTGTGAAAACTGGATTGAGCAATGAGGAGGTTCAGAATCGACGACGGAAATATGGATTGAACGAATTGGAAAAGCATGAAGGCCAATCGATTTGGAAATTGGTTCTGGAACAGTTCAACGACACGCTCGTTCGGATTCTCCTCGCCGCCGCAATAATCTCCTTCGTCCTTGCGTGGTATGATGGCAAAGAAGGCGGCGAAATGGAGATAACCGCTTTCGTGGAGCCGTTGGTGATTTTCTTGATTTTAATTGTGAACGCTATTGTTGGTGTGTGGCAAGAGAGCAATGCTGAGAAGGCGCTGGAAGCTTTGAAGGAAATTCAATCCGAGCACGCTACGGTTATTCGAGATAACCAGAAAATTCCGGATTTACCGGCTAAGGAATTAGTCCCCGGTGATATTGTTGAGCTTAAGGTTGGTGATAAGGTTCCCGCTGATATGCGAGTCGTGCAGTTGATTAGCTCAACTTTGCGGTTAGAGCAGGGTTCCTTAACAGGAGAGAGTGAAGCTGTGAACAAAACTAACAAGCCTGTTCCGGAAGATATGGATATTCAAGGGAAGAAATGTATTGTTTTTGCGGGGACCACAGTTGTTAATGGTAACTGCATTTGCTTGGTTACTCAGATTGGGATGGACACTGAGATTGGGAAGGTGCATAACCAGATACAAGAGGCTTCGCAGGGTGAGGAGGATACACCATTGAAGAAGAAGCTGAATGAATTTGGAGAGACACTGACTAAGATAATTGGATTGATATGCATATTGGTTTGGCTCATCAATGTTAAATATTTCCTGAGCTGGGAAATTGTTGATGGCTGGCCGAGGAACTTTAAGTTCTCATTCGAGAAGTGTACTTATTACTTCGAGATTGCTGTGGCTTTGGCCGTGGCTGCTATTCCAGAAGGTTTGCCTGCAGTGATCACAACTTGCTTGGCACTAGGTACACGCAAGATGGCGCAGAAGAATGCACTGGTTCGGAAGCTACCAAGTGTGGAAACTCTGGGTTGTACCACTGTCATTTGTTCGGATAAAACTGGTACATTGACTACGAATCAGATGTCAGTGACGAAATTGGTAGCTATTGGGACTAATGCTGATACACTGCGAGCCTTCAAGGTGGAAGGGACTACCTACAATCCAGCTGATGGTAGAATAGAGAACTGGCAGGCAGGTAAATTGGATGCAAATCTTGAGATGATAGCGAAAATTGCTGCTATCTGTAATGATGCTGGAGTCACACAGTCGGGGCATAAGTTTGCCGCCCATGGAATGCCAACCGAAGCAGCATTGAAGGTTTTGGTTGAGAAGATGGGCCTTCCTGAAGGATCCAAGGATGGATCATCAGCAACTTCAAGTAGTGTGCTCCGTAAGTTGAACCTTTCTGTCCTAAGTTGTTGTGAATGGTGGCATAAACATGACCCACGGATTGCCACTCTTGAGTTTGATCGTGATAGGAAGTCAATGGGTGTTATTGTTGACTCTAGTCTGGGAAAAAAGTCACTGCTGGTTAAGGGTGCTGTAGAAAACCTGTTAGAAAGAAGCACTAAAATTCAGTTGTCTGATGGTACTGTTGTGAAACTGGACAATAACGCTAAGAAACTTGTCTTGCAAGCTCTCCATGAAATGTCAACTAGTGCATTACGCTGCTTGGGTTTTGCATACAAGGATGAGCTCCCTGATTTTGAAAACTACAGTGGTAATGACGATCATCCAGCCCATCAGCTTTTGCTTAATCCTTCCAACTATTCATCAATTGAGAGTGATCTAATTTTTGTTGGCTTGGTTGGGTTGAGGGATCCTCCTAGGGAAGAGGTATACCAAGCAATTGAGGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACTGGTGACAATAAGAACACTGCAGAAGCTATATGCCATGAAATAGGTGTATTTGGACCAAATGAAGATATTAGTTCGAGAAGTTTAACTGGCAGAGATTTTATGGAACTGCGTGATAAAAAAGCCCATCTGAGACAGAGTGGTGGACTTTTATTTTCGAGGGCTGAACCTAGGCACAAGCAAGAAATTGTGAGGCTGCTCAAAGATGATGGAGAGGTGGTGGCCATGACTGGAGATGGTGTTAATGATGCACCTGCCTTAAAGCTTGCCGACATTGGTATTGCAATGGGCATTGCAGGGACAGAGGTGGCAAAGGAAGCTTCAGATATGGTTTTGGCAGACGATAATTTTAGTTCAATCGTTGCTGCTGTTGGTGAGGGTAGATCTATCTACAATAATATGAAGGCTTTTATCAGGTACATGATCTCTTCCAATATTGGTGAGGTTGCTTCCATATTTCTAACAGCTGCACTAGGTATCCCTGAAGGGTTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGATGGACCCCCTGCAACAGCTTTGGGATTTAATCCTCCCGATAAGGATATAATGAAGAAGCCTCCCCGCCGTAGTGACGACTCACTGATTAATTTGTGGATTCTATTCCGCTATATGGTAATTGGGATTTATGTTGGATTAGCTACAGTTGGTGTCTTCATCATATGGTATACACATGATTCCTTCTTGGGTATTGACCTTAGTGGGGACGGGCATACACTCGTTACTTATTCCCAACTTGCCAACTGGGGTCAATGCTCCTCATGGAATAACTTCACAGCTTCTCCCTTCACCGCCGGTTCTAAAGTTATCTCTTTCGATACGCCCTGTGACTATTTCCAGGGTGGTAAAGTGAAAGCTATGACACTATCCCTCTCTGTGTTGGTAGCTATTGAAATGTTCAACTCTCTCAATGCCCTTTCTGAAGATGGAAGCCTTCTAACAATGCCCCCTTGGGTCAATCCTTGGCTTCTTCTAGCAATGTCTGTGTCATTTGGTCTGCACTTTTTGATCTTGTATGTACCATTCTTAGCACAAGTATTTGGTATCGTTCCCCTTAGCGTCAACGAGTGGCTTCTGGTTCTGGCTGTTGCGCTTCCCGTGATTCTAATAGATGAGATTCTGAAATTCATTGGGAGGTGTACAAGTACAAGTGGGTCACAAGCAGCAGCTGCAAGATCAAAACAAAAATCAGAATAA 3180 0.4425 MVMNSENSDREIFKAWAKDVAECEEHFKVSVKTGLSNEEVQNRRRKYGLNELEKHEGQSIWKLVLEQFNDTLVRILLAAAIISFVLAWYDGKEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHATVIRDNQKIPDLPAKELVPGDIVELKVGDKVPADMRVVQLISSTLRLEQGSLTGESEAVNKTNKPVPEDMDIQGKKCIVFAGTTVVNGNCICLVTQIGMDTEIGKVHNQIQEASQGEEDTPLKKKLNEFGETLTKIIGLICILVWLINVKYFLSWEIVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTKLVAIGTNADTLRAFKVEGTTYNPADGRIENWQAGKLDANLEMIAKIAAICNDAGVTQSGHKFAAHGMPTEAALKVLVEKMGLPEGSKDGSSATSSSVLRKLNLSVLSCCEWWHKHDPRIATLEFDRDRKSMGVIVDSSLGKKSLLVKGAVENLLERSTKIQLSDGTVVKLDNNAKKLVLQALHEMSTSALRCLGFAYKDELPDFENYSGNDDHPAHQLLLNPSNYSSIESDLIFVGLVGLRDPPREEVYQAIEDCRAAGIRVMVITGDNKNTAEAICHEIGVFGPNEDISSRSLTGRDFMELRDKKAHLRQSGGLLFSRAEPRHKQEIVRLLKDDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYMVIGIYVGLATVGVFIIWYTHDSFLGIDLSGDGHTLVTYSQLANWGQCSSWNNFTASPFTAGSKVISFDTPCDYFQGGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSVNEWLLVLAVALPVILIDEILKFIGRCTSTSGSQAAAARSKQKSE 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1131 1059 Gene3D - 33 252 - -
Lal11g1131 1059 Pfam E1-E2 ATPase 136 350 - -
Lal11g1131 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 372 378 IPR018303 -
Lal11g1131 1059 PRINTS P-type cation-transporting ATPase superfamily signature 189 203 - -
Lal11g1131 1059 PRINTS P-type cation-transporting ATPase superfamily signature 370 384 - -
Lal11g1131 1059 PRINTS P-type cation-transporting ATPase superfamily signature 622 633 - -
Lal11g1131 1059 PRINTS P-type cation-transporting ATPase superfamily signature 644 654 - -
Lal11g1131 1059 PRINTS P-type cation-transporting ATPase superfamily signature 728 747 - -
Lal11g1131 1059 PRINTS P-type cation-transporting ATPase superfamily signature 752 764 - -
Lal11g1131 1059 PANTHER CALCIUM-TRANSPORTING ATPASE 5 1056 - -
Lal11g1131 1059 Gene3D - 380 629 IPR023299 GO:0000166
Lal11g1131 1059 SFLD C1.7: P-type atpase like 351 780 - -
Lal11g1131 1059 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 5 1056 - -
Lal11g1131 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 377 626 IPR023299 GO:0000166
Lal11g1131 1059 Gene3D - 66 1040 - -
Lal11g1131 1059 SFLD p-type atpase 351 780 IPR044492 -
Lal11g1131 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 309 392 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g1131 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 702 809 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g1131 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 297 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g1131 1059 Pfam Cation transporting ATPase, C-terminus 813 1038 IPR006068 -
Lal11g1131 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 1041 IPR023298 -
Lal11g1131 1059 Pfam haloacid dehalogenase-like hydrolase 367 742 - -
Lal11g1131 1059 SUPERFAMILY Calcium ATPase, transduction domain A 138 250 IPR008250 -
Lal11g1131 1059 SMART Cation_ATPase_N_a_2 14 88 IPR004014 -
Lal11g1131 1059 Pfam Cation transporter/ATPase, N-terminus 16 83 IPR004014 -
Lal11g1131 1059 Gene3D - 367 773 IPR023214 -
Lal11g1131 1059 SUPERFAMILY HAD-like 619 832 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1131 Lal-Chr11 15058763 15064960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1131 3 1059 Primary Pumps ATPases(2) AT1G07810 80.057 0.0 1724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1131 K01537 - gmx:100788807 1835.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1131 11 15058763 15064960 Lal11g1131 11 15058763 15064960 ECH
Lal11g1131 11 15058763 15064960 Lal1g1840 1 20670598 20676865 LSH
Lal11g1131 11 15058763 15064960 Lal20g0070 20 465505 471429 LSH