Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1115 ATGAGTCAATTCCTGAAGCCTGAGAATGCTCTCAAAAGAGCAGAAGAATTGATCAACGTTGGGCAGAAGCAAGATGCTTTGCAGACTCTTCATGACCTAATCACTTCAAAAAGATACCGAGCGTGGCAGAAGACACTCGAAAGGATCATGTTCAAGTACGTCGAGCTGTGTGTTGAAATGCGTAAAGGGCGGTATGCGAAGGATGGGCTCATTCAGTATCGTATCATATGTCAGCAAGTTAATGTTGGTTCTCTAGAAGAGGTAATCAAGCATTACATGCACCTCTCGACTGAGAAAGCTGAAAAGGCTCGGAGCCAGGCACAGGAATTGGAAGACGCTCTCGATGTTGATGATTTAGAGGCAGATAAAAAGCCCGAGGATCTGATGCTCAGCTACGTCAGTGGAGAAAAGGGAAAGGAGAGATCTGACCGAGAGCTTGTTACTCCATGGTTTAAGTTTCTCTGGGAAACATACAGGACAGTGCTTGAAATTTTGCGAAACAACTCCAAACTCGAAGCCCTATATGCTATGACAGCTCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACGACTGAGTTCCGCAGACTTTGTGAAATCATAAGAAACCACTTGGCGAATCTGAATAAATACCGTGACCAACGAGACCGACCTGATCTTTCTGCTCCTGAAAGCTTGCAACTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCAACTGAACTTGAACTCTGGCAGGAAGCTTTTCGATCAGTTGAAGATATACATGGCCTAATGTGCTTGGTCAAGAAAACGCCCAAATCATCCTTGATGGTCGTTTACTATGCTAAGCTGACCGAGATATTTTGGATATCATCAAGTCATTTATATCATGCATACGCATGGTTCAGGCTCTTTTTGTTACAAAGAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCGGTTCCTCCTCATGATCACACTCATGGTGCATCTCATTTTGAACTGGAGCATGAGAAGGAGAGAAATTTCAGGATGGCTAACCTGATTGGCTTTAATCTTGAAACCAAACCTGAAGGCAGAGAAGTGCTTTCCAGGTCATCGCTTCTTGCTGAACTGGCTTCCAAGGGTGTGATGTCTTTTGTAGCTCAGGAAGTGAAGGACATTTACCATCTTGTGGAACATGAATTTCTTCCATCAGATCTTGCATTAAAAGTGCAGCCCTTGTTAACCAAAATCTCAAAGTTAGGGGGTAAGCTTTCCACTGCTTCAACTGTCCCTGAGGTGCAACTGTCTCAGTATGTCCCTGCATTGGAGAAACTGTCTACCTTGAGGTTGCTACAGCAGGTGTCTAATGTGTATCAGACAATGAAGATCGAGACCTTATCTGGGATGATCCCATTCTTTGATTTTTCAGTAGTGGAAAAAATTTCTGTGGATGCTGTTAAGCAGAAGTTTGTATCAATGAAAGTTGATCACATGAAAAATGTTGTAGTCTTCTGCAAAGTGAGTCTTGAGTCTGATGGTTTAAGGGATCACCTGGCCAACTTTGCTGAACAATTGAACAAGGCAAGACAAATGATTTATCCTCCAGAGAGGAAGCCATCAAAACTTGGAGCTTTGCTTCCCTCTTTGACTGAGATTGTGGCCAAGGAACACAAGAGGCTTCTTGCTCGGAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAGCGGCAACTTCTTGAAATGGAACGTGAGGAGGAGTCAAAGAAGTTAAAACTGCAGAAAATAACTGAAGAAGCTGAACAAAGAAGACTTGCCGCCGAGTTTGAGCAGAGGAAGAACCAGAGGATCCTCAGGGAAATAGAGGAAAGACAAATGGAGGAAACTCAAGCTTTGCTTCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATCATTGAGGGGGATAAAATGTCCAAGCAAACTCTGATGGAGTTGGCTTTGACTGAACAACTCAGAGAAAGACAAGAAATGGAGAAGAAACTGCAAAAATTAGCTAAAACCATGGATTATTTGGAAAGAGCTAAAAGAGAAGAGGCTGCTCCCCTGATTGAAGCTGCGTATCAGCAGCGCCTAGTGGAAGAGAGGATTCTTCATGAGCATTTGCAGCAGCAAGAGGTTGAATTGAGCCAACAGCGCCATGAGGGAGATCTCAGGGAGAAGGACAGACTTGTTCGAATGATTAGCAATAAAGAGATATATCAAGAGAGAGTTGTCAGTCATCGCCAAGCAGAATTTGACAGATTGAGTCGGGAAAGGGAGGAGCGGATCTCTAGGATTTTACTGTCCAGGAGACAGGAGAGGGAAAAACTGAGGAAGCTGAAGTTTTATCTGAAGCTAGAAGAAGAGAAGCAGGAAAAACTGCGTGCAGAGGAAGAAGCACGAAAGCAAGAAGAGGCTGAAAGGCGAAAGAAGGAAGAGGCTGAACGCCTCGCAAAATTAGCCGAGATCGCTGAAAAGCAGAGGCAGAGAGAACTGGAACTCGAAGAAAAGGAAAGAAAGAGAAGAGAAGAATTGTTGGGCCGAACCGCTGAAGCAGCTTTGAAGCCTTCTGAGCCTCTTGCCCGTTCATCTGAGTCTCTATCTGCTGCTCCTGCTGCAGCAGCTGCAGCTCCAGCCGCTGGGAAATATGTTCCAAAGTTCCGACGTGAGAGGACTGAAGGTGCAGGTGCTGCTGCTTCTGCTCCTCCTCCAGAAACTGATCGCTGGTCTAAGCCAGATGGTGACAGGTGGCGCAGTGGCGATGATCGGAGACCCTCAGCATTTGGTTCAGGTTCAAGAGCATCATCCACATGGTCATCCTCCAGGAACCGTTGA 2874 0.4461 MSQFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVEMRKGRYAKDGLIQYRIICQQVNVGSLEEVIKHYMHLSTEKAEKARSQAQELEDALDVDDLEADKKPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFRLFLLQRSFNKNLSQKDLQLIASSVVLAALSVPPHDHTHGASHFELEHEKERNFRMANLIGFNLETKPEGREVLSRSSLLAELASKGVMSFVAQEVKDIYHLVEHEFLPSDLALKVQPLLTKISKLGGKLSTASTVPEVQLSQYVPALEKLSTLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVVFCKVSLESDGLRDHLANFAEQLNKARQMIYPPERKPSKLGALLPSLTEIVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKKLKLQKITEEAEQRRLAAEFEQRKNQRILREIEERQMEETQALLQEAEKRIKKKGKKPIIEGDKMSKQTLMELALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERILHEHLQQQEVELSQQRHEGDLREKDRLVRMISNKEIYQERVVSHRQAEFDRLSREREERISRILLSRRQEREKLRKLKFYLKLEEEKQEKLRAEEEARKQEEAERRKKEEAERLAKLAEIAEKQRQRELELEEKERKRREELLGRTAEAALKPSEPLARSSESLSAAPAAAAAAPAAGKYVPKFRRERTEGAGAAASAPPPETDRWSKPDGDRWRSGDDRRPSAFGSGSRASSTWSSSRNR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1115 957 MobiDBLite consensus disorder prediction 840 957 - -
Lal11g1115 957 SMART PINT_4 441 532 IPR000717 -
Lal11g1115 957 Gene3D - 268 359 - -
Lal11g1115 957 Gene3D - 360 511 - -
Lal11g1115 957 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 936 IPR027512 GO:0005852
Lal11g1115 957 Pfam PCI domain 373 508 IPR000717 -
Lal11g1115 957 Coils Coil 796 856 - -
Lal11g1115 957 MobiDBLite consensus disorder prediction 921 936 - -
Lal11g1115 957 MobiDBLite consensus disorder prediction 806 827 - -
Lal11g1115 957 MobiDBLite consensus disorder prediction 840 862 - -
Lal11g1115 957 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Lal11g1115 957 Gene3D UVR domain 217 267 - -
Lal11g1115 957 Coils Coil 667 697 - -
Lal11g1115 957 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 908 IPR027512 GO:0005852
Lal11g1115 957 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lal11g1115 957 Coils Coil 561 602 - -
Lal11g1115 957 Coils Coil 610 649 - -
Lal11g1115 957 MobiDBLite consensus disorder prediction 942 957 - -
Lal11g1115 957 Coils Coil 93 120 - -
Lal11g1115 957 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1115 Lal-Chr11 14890637 14897658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1115 1 957 Eukaryotic Initiation Factors Gene Family AT4G11420 71.211 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1115 K03254 - gmx:100803796 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1115 11 14890637 14897658 Lal1g1850 1 20786407 20792984 LSH