Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1106 ATGTTTAAATTAATTAATCATAGAGTTACTATAAAATCCGACAAAGTGAACGAGTCGGTGAACCACTTCTCTCTCTCAAAGCCACACACTAAAACTTTTCTCTCCGTTCCTCTGCCTGCCACGTCAGATCCCGCCGTTCCTTCGCCACCACCACCGCTATTAGAGATCTTCATTAAGCTCAGATGTTATGTAATTAATTATGGTGTTGAAATGAATGGGGCTCAAAGAAGAAAAATTCACAATGTTGAGAAACCTTTCCCAGGGTGCTTGGGAAGAATGGTTAACATCTTTGATTTTACTCCTGCTGCGACCGGGAACAGGCTACTCACAGATAAGCCGCATCGTGATGCTTCTTCACTTTCACGAAGTCAGTCAGATGTTGTGAGGGTTGTCAATTCCACATTTGGTGATCATCTAGAGGATAAGATGATTGTTTGTGACTCGATGAAAGCAACCCCAAAGAAAAAAATAAGTGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAAATTGTTTCCAAGCACAATCCACCAAATGTAGTTGCTAAACTAATGGGTCTTGATGCTCTCCCACAGGGAGAGTCTAATTTAGCTGAGGAGAGAAGCCATAGAGGAGATTATTCTCAACGTATGTATGGTCATTCAAGGACACCGTTCAAGCATTGGAAGCAAGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCCCAGCACAGAACAGATTGCTCACAAAGATGTTTATGATATTTGGCTGCGATCTCAGAGAAAAAATAATGTAAGAGACAAGACGCAAGAAAGGGAAAAGTGGACTGAAGATGTTAATGTGGAAAAAATGGCTCTCGTTTACCAGAAATTCATGGAAGCAAAACATCTGTCTACAGATGAGAGACTGCGCCAGTCCAAGGAGTTTGACGAGGCCTTGGAAGTTTTAAGCTCCAATAATGATCTCTTAATCAGGTTACTGGATTCTCCAAATCTGTATGAACTTCAGTCTACTCCACTAGTTGAAACAAAGCGTATTACCGTTCTTAAACCTTCGAAGATGGTTGACAATGAAAAAACATGTGGAAAGGGGAAGAATGACAAGCAGATTAAGAAAACAGAAAATGTTTGTCAAGCAGCTGTATGGGAGAATAATATCCCTGGATACTCTCCAGCCTGTCAGAAAGTTGATAAGTTTCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTACCTCTGGGAAGACACAAGAGATTAAGGCTGTGGCTTCTCCAACAATTTCATCACCTCGGAATATGCAAAGTGGAAATTTCTATCAGGGACCTGAAGACAGTGGTCCACTAGAACCAAGAGAAGCTGCACAAGAAATTACACAGCAAATGCATGAAAGCCTGAGGAGCCATCAACAAGATGAAACATTTTATTCTTCGGTATTTTCCAATGGCTATACTGGTGACGAGAGTTCATTCGAAAAATCAGATAATGAGTATACTGCTGGGAATTTGAGTGATTTGGAAGGTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGACAGTCCTTATTCTTCATCACCATTCAGTCGTGCATCCTGTTCTCCGGAGTCATCGGTATGCAGGGAGGCCAAAAAACGGCTTTCTGAAAGATGGGCCATAATGGCATCAAATATGGGTCCTCAAGAACAAAAGCATTTGTGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCGGACATAAAGAAATCTGTAATATCTGAGGTTGAAGGTATTAGTAAGGAACAAGAACCAAGTGAAGCAGTTTCTTGCAGTCGTAATTTCAGTGAAGAAATATGTATGGATGGTTCACCTAAAAATCTTCCCAGGTCAAAATCTGTCCCTGTATCTTCTACTGCATATGAAACCAGGCTCAACAGTGAAGTTTGTTATCATGATGCCAGCAAAACACATGTTTCCAAGGAACTGGCAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTGGCGAGTTTCTTATTCTCAAGGAATAAGAAATCAACCAAGGAAAAGTCTCCTCTGTCTCAATCTAAAGACGAATCGCAATCTAATGTCTCTGAAACATCACTATCTCCAGTAAATTCACTTGGAGTCCTTAGGGATGGTATGTCTCAAGGGTGTTCTCTTCCAGATCTACAAGAATCATCAGGCAAAAATTTATCAGATTCTGTCTCTAAAGGAAAAGGCATAATATCTCTTGAGCCTGGGTGGACTGTGTCAAAGACTATGGTGCCACAGCTTTCAAGTGAAAACCAAGATCATCCGAGTCCAATTTCAGTTTTAGAACCTCCATTTGAAGATGATAATGCAGCTCATGAGTCCTTGCACTGTATGAAGGGTGGTCAGCTAGGATCACGGGTGTCTCTGAAATCTAATTTAATTGACAAGTCACCACCAATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTGTGCAGAGGTATCAAGTCCATATCCGTTAAATCCCTCCTTGGTTTCCCTAGACACCAAGGTAGAGGAACAAGACTTGCTTGTCTTGGTTGAGAAACTACTATCAGCAGCTGGACTTGATGATGATCAAGTACAGTCTGATTCATTTTACTCAAAATGGCATTCCCTTGAAAGTGCACTGGACCCATCATTGAGGGACACATATGCCAATGTGAATGACAAGGAGCCTCATCCTCTCCATGAAGCCAAGAGAAGGCAGAGAAGATCAAATCAGAAGCTTGTATTTGATTGTGTCAATGTTGCAGTAATGGAAATTACTGGTTATGGATCAGAAACATTCTTAATGAACAGGTTGTGTAGTAGGGGCCACAGCAGGGTTCCTGTCCCAGAAGGTGAAACTCCCCTATTGATGGACCTCATTGTGGCCCAAATAAAAGAGTTAATATCTGGTGGGTTGAGGTCTGTTTGGAGGGATTGTGGGGACAGTAACAGCCTGGTGCTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGTTTATGGGACTTGAGATGGATATTTTGGTGAAGGAAATAGAAAGGAAGTTGCTAGAAGAACTTGTGGAGGATGCTGTGGTTGATTTGACAGGCAGGGCCTGA 3135 0.4175 MFKLINHRVTIKSDKVNESVNHFSLSKPHTKTFLSVPLPATSDPAVPSPPPPLLEIFIKLRCYVINYGVEMNGAQRRKIHNVEKPFPGCLGRMVNIFDFTPAATGNRLLTDKPHRDASSLSRSQSDVVRVVNSTFGDHLEDKMIVCDSMKATPKKKISGTPIKMLIDQEMSKEIVSKHNPPNVVAKLMGLDALPQGESNLAEERSHRGDYSQRMYGHSRTPFKHWKQEDRFMDKEMLHEVHPSTEQIAHKDVYDIWLRSQRKNNVRDKTQEREKWTEDVNVEKMALVYQKFMEAKHLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSPNLYELQSTPLVETKRITVLKPSKMVDNEKTCGKGKNDKQIKKTENVCQAAVWENNIPGYSPACQKVDKFPVQPTRIVVLKPTSGKTQEIKAVASPTISSPRNMQSGNFYQGPEDSGPLEPREAAQEITQQMHESLRSHQQDETFYSSVFSNGYTGDESSFEKSDNEYTAGNLSDLEGMSPSPRHSWDYINRCDSPYSSSPFSRASCSPESSVCREAKKRLSERWAIMASNMGPQEQKHLWRSSTLGEMLALSDIKKSVISEVEGISKEQEPSEAVSCSRNFSEEICMDGSPKNLPRSKSVPVSSTAYETRLNSEVCYHDASKTHVSKELAKSKSMKSSFKGKVASFLFSRNKKSTKEKSPLSQSKDESQSNVSETSLSPVNSLGVLRDGMSQGCSLPDLQESSGKNLSDSVSKGKGIISLEPGWTVSKTMVPQLSSENQDHPSPISVLEPPFEDDNAAHESLHCMKGGQLGSRVSLKSNLIDKSPPIESIARTLSWDDSCAEVSSPYPLNPSLVSLDTKVEEQDLLVLVEKLLSAAGLDDDQVQSDSFYSKWHSLESALDPSLRDTYANVNDKEPHPLHEAKRRQRRSNQKLVFDCVNVAVMEITGYGSETFLMNRLCSRGHSRVPVPEGETPLLMDLIVAQIKELISGGLRSVWRDCGDSNSLVLESVVRKEVVGKGWVEFMGLEMDILVKEIERKLLEELVEDAVVDLTGRA 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1106 1044 MobiDBLite consensus disorder prediction 725 742 - -
Lal11g1106 1044 MobiDBLite consensus disorder prediction 485 505 - -
Lal11g1106 1044 Pfam DUF761-associated sequence motif 180 195 IPR032795 -
Lal11g1106 1044 MobiDBLite consensus disorder prediction 485 510 - -
Lal11g1106 1044 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 71 1043 - -
Lal11g1106 1044 MobiDBLite consensus disorder prediction 694 712 - -
Lal11g1106 1044 MobiDBLite consensus disorder prediction 422 451 - -
Lal11g1106 1044 Pfam Domain of unknown function (DUF4378) 859 1035 IPR025486 -
Lal11g1106 1044 Pfam Protein of unknown function (DUF3741) 289 331 IPR022212 -
Lal11g1106 1044 MobiDBLite consensus disorder prediction 684 742 - -
Lal11g1106 1044 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 71 1043 - -
Lal11g1106 1044 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1106 Lal-Chr11 14781444 14788206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1106 71 1041 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.775 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1106 - - gmx:100816611 1462.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1106 11 14781444 14788206 Lal11g1106 11 14781444 14788206 ECH
Lal11g1106 11 14781444 14788206 Lal1g1867 1 20940379 20945752 LSH
Lal11g1106 11 14781444 14788206 Lal20g0044 20 314397 318956 LSH
Lal11g1106 11 14781444 14788206 Lal12g0878 12 7219001 7223231 PCT
Lal12g0878 12 7219001 7223231 Lal11g1106 11 14781444 14788206 PCT