Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1104 ATGGCTGCTACTCCTAATCTTATAGCTGGGTCCCATATTTGGGTGGAGGACTCTGATGTAGCTTGGATAGATGGTAAGGTCTTGGAGGTTAATAAAGAAGAAATCAAAGTTCTTTGCACTTCAGGGAAGACGGTTGTTTTTAAAGCTTCCAATGTTTATCATAAAGATACCGAACTCCCACCAAGTGGAGTAGATGATATGACAAGGCTTGCATACCTGCATGAACCCGGAGTCCTAGATAATCTTAGATCGAGATATGATATCAATGAAATTTATACTTATACTGGGAATATATTAATCGCTGTCAACCCTTTTATGAATCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGATCAGCTTTTGGTGAGTTAAGTCCACATCCCTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATAAATGACGGTATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGTGCTGGTAAAACAGAATGTACTAAGTTACTTATGCGGTATCTTGCTTACATGGGAGGGAGAGCTGCTACGGTGGCTGAAGGTAGAACTGTTGAGCAAAAAGTTCTGGAGTCTAACCCTGTTCTCGAAGCCTTTGGAAATGCAAAGACTCTTAGGAACAATAACTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCATAAGGGAAGAATTTCTGGAGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGTCAGGTGTCGGATCCAGAAAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTCCCGAGGAAGTGAAGAAGTACAAATTAGGAAACCCAAGAACATTTCACTATCTGAATCAATCAAATTGCTATGAGTTGCAAGGGGTCGATGAATCTAAAGAATATAGAGCCACAAGGAGCGCAATGGATGTTGTTGGAATAAGTTCCGAGGAGCAGGATGCAATATTTCGGGTCGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCGAAAGGAAAGGAGACAGACTCATCTGTGCCCAAAGATGAAAAGTCTCGGTTCCATCTAGAGACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGCGATGAAACAATTACAAAATGGCTGGATCCAGAGAGTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATTGTATACACACGGTTATTTGACTGGTTGGTCGATAACATCAATAACTCCATTGGTCAAGACCCTGAGTCAAAGTCCTTAATTGGAGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGGCCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATCGAGTTTGTCGACAATCAAGATGTTCTTGATCTCATTGACAAGAAACCTGGTGGCATTATTGCTCTACTGGATGAAGCTTGTATGTTTCCGAGATCAACACCTGAAACTTTTGCCCAAAAGCTATATCAGACCTTCAAAAACCACAAAAGGTTCAGCAAGCCTAAATTATCGCGTAGTGGCTTCACAATTGACCATTATGCTGGCGATGTCACTTATCAAACCGATTTATTCCTCGACAAGAACAAAGACTACATTGTTGCAGAACACCAAGAACTTCTCTATGCTTCCAAATGCTCCTTTGTATCAAGTTTGTTTCTTCCTTCACCTAATCTGTCATCCAAAAAATCGAAGTTCTCTTCAATAGGTTCACAATTTAAGCAACAATTGCAAGCTTTACTTGAAACTCTCAGTGCCACTAAGCCACACTACATTCGTTGTGTAAAACCAAATAATCTTCTTAAGCCAGCTATTTTTGAGAATAAAAATGTTTTGCTGCAACTGCGTTGTGGGGGAGTTATGGAAGCTATAAGGATAAGCTGTGCTGGGTATCCCACTAGAAAAACATTTCACGAATTTGTGGATCGTTTTGGCCTTCTTTCACCTGAAGTGTTGAATGGAAGTATTGATGCCGTTGCTGCTTGCAAAAGGATTCTAGAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCATAGGAGTGAGATCTTAGGAAAGTCAGCAAGCATTATCCAGAGGAATGTCCGTTCCTATTTGGCGTACCGAAGTTTTATCTCTGTTCGTTTGTCTGCTATTCAAATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGTAATGCGGAAGGAGGCTTCTAGTTTGATGATTCAGGCATGTCTTCGCATGCATATTGTTAGGAAGACATACAAAGAGTTGTATACCTCTGCTTCCTCTATTCAGACTAGTATGCGAGGGATGGCGGCTCGCTGTGAGCTACGCTTTAGAAGGCGGACTAGAGCAGCAATTGTCATTCAGAGTCGCTGGCGAAAATACCTGGCACTACTTCATTTTACAAGATTAAAGAAGGCAGCAATTACCATGCAATGCGCATGGAGAGGAAAAGTTGCACGACTTGAATTGCGGAAGCTCAAGATGGCTGCAAGAGAGACAGGTGCTCTTCAAGCTTCCAAAACTAAGCTTGAAAAGCAAGTTGTAGACCTTACATTGAGGTTGCAGCTAGAAAAACGTTTGAGGGTTGACATGGAAGAAGCAAGAATACTAGAGAACAAAAGATTACAGTCTGCATTGCAAGAAACTAAGATACTTCTTGAGAAGGAGCGCGAGGCTACGAAAAAAGCAGAAGAGAGAGTAACTGTCATAAAGGAGATTCCAGTTGTTGATCATGCTTTGTTGGAGAAGCTCAGTAGCGAAAATGAAAAACTCAAGAACATGTTGAGTTCACTGGAAAAGAAAATTGATGAAACTGAAAAAAAGTATGAAGAGGCAAACAAAATTGGCGAAGAAAGGTTGAAGCAAGCTTTGGAAGCCGAGTCGAAAGTATTCCAATTGAAAACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGACACTGAATCTGCATACCATATCCTTCAGAAACAATCACAGTTAAACTCATCTGTGAAAACAATAGCAGAGCACCTCCCAACTCCTGTAGCTGAGAAGTTGGAAAATGGTCACCATGTGAAAGAAGAGCAGAAATTTATTGAAACGCATGTTGCACCCGTGGAACAGTTTGGTACAGAATCTGATACTAAATTGAGGAGATCTTTCGTTGAACGAAGACAACATGAGAATGTTGATTCACTTGTCAACTGTGTAAGGAAAAATATTGGCTTCAATCATGGAAAGCCTATTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGATAGAACTAGTGTATTCGACCGCCTTATTCAGATGATTGGTTCAGAAATTGAGGATCAAGATGGAAATGATCTTATGGCTTATTGGCTGTCAAATACATCTGCATTGTTGTTTCTAATTGAACAAAGCCTTAAACCTTGTGGTGCAACGGCTGCGACCGCAGCTAGAAGACCACCAAGTCCTACATCCCTTTTGGGAAGAATGACGGGTTTTCTTTCACCCCCTTCTGCTAATATTGCTGCCCATGCATTCGAGGTTGTGCAAAAGGTAGAGGCTAAATACCCTGCAGTGCTTTTCAACCAGCAGCTCACGGCCTATTTGGAGAAAATGTATGGCATCATTCGAGACAACTTGAAAAAGGAGTTAACATCCGTACTTGCATCATGTATCCAGGCTCCTTATGCAAATCTTATTGCTGATATACAGGCACCAAGAACTTCAAAGGGAGTGTCAGGATCTGTTCGAAGCTTAGGGAGAGATTCTGCAATTGTTCTCTGGCAGAGTATTATTGAATCCCTGAATACCCTCCTCTGTACACTGAAAGTGAACTTTGTGCCTCCGGTTCTTATACAAAAGATCTTCAGTCAAACATTCTCATATATTAATCTGCAACTCTTCAATAGGTTAACACTTTTGTTTCAAAATATGATCACTAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAACGGGGAATATGTGAAAGCTGGATTGGCTGAATTGGAGATTTGGTGCTGTCAAGCAAAAGAAGAAGATAAGGTGATGATAACCTGCGACTTTTGTGTCGTTTTGGACTCGTGTTCACATCTTCGTCAAAGATCCGGACTAATTGCCTTTAGTTTGCAGTATGCAGGGTCATCTTGGGATGAACTGAAGCACATAAGACAAGCTGTTGGGTTCTTGGTTATTCATCAGAAGTATAAGGTTTCCTATGATGAAATCATTAATGATTTATGCCCTATACTGAGTGTCCAGCAGCTGTATAGAATATGCTCACTTTACTGGGATGACAACTACAATACTCTGAGCGTATCTCCGGATGTCCTTTTAAGAATGAAGTTGCTTATGACTATGGATTCCAATAGCGCTCAGAGCGATTCTTTCTTGATTGATGACAGTTCCAGCATAATCCCTTTCTCAGTGGATGACCTTTGTAAATCATTGCAATTGGAGGATTTCTCAGACTTGGAACCAGCAGATGAGCTTCTTGAGAATCCAGCCTTCCAATTTTTAAATGAGTCGTAG 4683 0.4074 MAATPNLIAGSHIWVEDSDVAWIDGKVLEVNKEEIKVLCTSGKTVVFKASNVYHKDTELPPSGVDDMTRLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFMNLPHLYDSHMMAQYKGSAFGELSPHPFAVADAAYRLMINDGISQSILVSGESGAGKTECTKLLMRYLAYMGGRAATVAEGRTVEQKVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDHKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEVKKYKLGNPRTFHYLNQSNCYELQGVDESKEYRATRSAMDVVGISSEEQDAIFRVVAAILHLGNIEFAKGKETDSSVPKDEKSRFHLETAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYTRLFDWLVDNINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLANEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDVLDLIDKKPGGIIALLDEACMFPRSTPETFAQKLYQTFKNHKRFSKPKLSRSGFTIDHYAGDVTYQTDLFLDKNKDYIVAEHQELLYASKCSFVSSLFLPSPNLSSKKSKFSSIGSQFKQQLQALLETLSATKPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFHEFVDRFGLLSPEVLNGSIDAVAACKRILENVGLEGYQIGKTKVFLRAGQMAELDTHRSEILGKSASIIQRNVRSYLAYRSFISVRLSAIQIQAACRGQLARQVYEVMRKEASSLMIQACLRMHIVRKTYKELYTSASSIQTSMRGMAARCELRFRRRTRAAIVIQSRWRKYLALLHFTRLKKAAITMQCAWRGKVARLELRKLKMAARETGALQASKTKLEKQVVDLTLRLQLEKRLRVDMEEARILENKRLQSALQETKILLEKEREATKKAEERVTVIKEIPVVDHALLEKLSSENEKLKNMLSSLEKKIDETEKKYEEANKIGEERLKQALEAESKVFQLKTAMQRLEEKFSDTESAYHILQKQSQLNSSVKTIAEHLPTPVAEKLENGHHVKEEQKFIETHVAPVEQFGTESDTKLRRSFVERRQHENVDSLVNCVRKNIGFNHGKPIAAFTIYKCLLHWKSFEADRTSVFDRLIQMIGSEIEDQDGNDLMAYWLSNTSALLFLIEQSLKPCGATAATAARRPPSPTSLLGRMTGFLSPPSANIAAHAFEVVQKVEAKYPAVLFNQQLTAYLEKMYGIIRDNLKKELTSVLASCIQAPYANLIADIQAPRTSKGVSGSVRSLGRDSAIVLWQSIIESLNTLLCTLKVNFVPPVLIQKIFSQTFSYINLQLFNRLTLLFQNMITSLLLRRDCCTFSNGEYVKAGLAELEIWCCQAKEEDKVMITCDFCVVLDSCSHLRQRSGLIAFSLQYAGSSWDELKHIRQAVGFLVIHQKYKVSYDEIINDLCPILSVQQLYRICSLYWDDNYNTLSVSPDVLLRMKLLMTMDSNSAQSDSFLIDDSSSIIPFSVDDLCKSLQLEDFSDLEPADELLENPAFQFLNES 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1104 1560 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Lal11g1104 1560 Gene3D Kinesin motor domain 65 664 IPR036961 -
Lal11g1104 1560 SMART iq_5 759 781 IPR000048 GO:0005515
Lal11g1104 1560 SMART iq_5 784 806 IPR000048 GO:0005515
Lal11g1104 1560 SMART iq_5 736 758 IPR000048 GO:0005515
Lal11g1104 1560 SMART iq_5 807 829 IPR000048 GO:0005515
Lal11g1104 1560 SMART iq_5 855 877 IPR000048 GO:0005515
Lal11g1104 1560 SMART iq_5 832 854 IPR000048 GO:0005515
Lal11g1104 1560 Coils Coil 1009 1043 - -
Lal11g1104 1560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 787 IPR027417 -
Lal11g1104 1560 ProSiteProfiles Dilute domain profile. 1152 1504 IPR002710 -
Lal11g1104 1560 Coils Coil 906 952 - -
Lal11g1104 1560 SMART DIL_2 1337 1486 IPR002710 -
Lal11g1104 1560 Gene3D - 668 735 - -
Lal11g1104 1560 Gene3D - 254 312 - -
Lal11g1104 1560 Gene3D - 441 625 - -
Lal11g1104 1560 Pfam DIL domain 1338 1483 IPR002710 -
Lal11g1104 1560 PANTHER MYOSIN-14 1428 1557 - -
Lal11g1104 1560 PANTHER MYOSIN-14 9 1398 - -
Lal11g1104 1560 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Lal11g1104 1560 CDD MyosinXI_CBD 1103 1528 IPR037975 GO:0007015
Lal11g1104 1560 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Lal11g1104 1560 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Lal11g1104 1560 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Lal11g1104 1560 Pfam IQ calmodulin-binding motif 858 877 IPR000048 GO:0005515
Lal11g1104 1560 Pfam IQ calmodulin-binding motif 834 852 IPR000048 GO:0005515
Lal11g1104 1560 ProSiteProfiles IQ motif profile. 785 814 IPR000048 GO:0005515
Lal11g1104 1560 ProSiteProfiles IQ motif profile. 761 789 IPR000048 GO:0005515
Lal11g1104 1560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 885 IPR027417 -
Lal11g1104 1560 SMART MYSc_2a 56 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 PANTHER MYOSIN 9 1398 - -
Lal11g1104 1560 PANTHER MYOSIN 1428 1557 - -
Lal11g1104 1560 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Lal11g1104 1560 Coils Coil 967 1001 - -
Lal11g1104 1560 CDD MYSc_Myo11 76 722 IPR036018 -
Lal11g1104 1560 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal11g1104 1560 Gene3D - 836 884 - -
Lal11g1104 1560 Gene3D - 737 786 - -
Lal11g1104 1560 Gene3D - 787 835 - -
Lal11g1104 1560 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1104 Lal-Chr11 14724703 14739239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1104 1 1558 Myosins gene family AT5G43900 68.766 0.0 2166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1104 K10357 - gmx:100795648 2448.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1104 11 14724703 14739239 Lal11g1104 11 14724703 14739239 ECH
Lal11g1104 11 14724703 14739239 Lal1g1868 1 20954802 20967651 LSH
Lal11g1104 11 14724703 14739239 Lal13g0713 13 4648117 4663871 PCT
Lal11g1104 11 14724703 14739239 Lal24g0806 24 6369744 6393004 PCT
Lal13g1069 13 7966019 7985016 Lal11g1104 11 14724703 14739239 PCT
Lal24g0806 24 6369744 6393004 Lal11g1104 11 14724703 14739239 PCT
Lal13g0713 13 4648117 4663871 Lal11g1104 11 14724703 14739239 PCT