Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1103 ATGCTCCCACCACCACCACCACCGCCACCGGTTACGTTGCCGGAGCTTCATTTCTCTTCCTTATCATTCAATTCGTTTTTTGGCTACAAAAAATGCAGAATTGTCTTTTCTTCTTCCTTGCCCTTTTCAACTTTCTTTTCTCTTCATCGGTCGTTTTCTCTGAGTGTATCATTCATTTCATCCGAACGAGCTAAAACATGGTTAGTTAAACCTTCTTCTAGACCATCTCTCGCACCAGCACCATCTCCATCTTATCAAGGTCCTAGCTTGACTCCAAGACCACGACATTATCGCCATCGTGGTCACCATCATAGCATGACACCTTATGCAGTGGCTCCACCCCCTTCAAAAGACCAAGCTTGTGTCTGTATGGAACCGCTCACATCAACTCCCTACGGTTCTCCTTGTGGATGTGTATTTCCCATGAGAGTCAGACTTTCACTGGATATAGCTCTTTATGCTGTTTTTCCAGTAATGAATGAGTTAGAGATTGAAGTTGCATTAGGCACATATTTAGGGCAAAGTCAGGTAAAGATAATGGGTGCCAGTGCTGACAGTCAAAACCAGGGAAGGACTGTTGTTGATATTTACTTGGTTCCTCTGGGAGAGAAATTTGATGATACCACTGCATCTCTGACATCTGAGAGGTTTTGGCACAAGAAAGTTCCTCTGAATAGGAGCCTTTTTGGTGATTATACTGTCGTGTACCTTACTTATCAAGGATTTCCACCATCACCACCATATGGAAATTATGATGGGAGTGATCCCAGTGAAAGTCCTGGTGGTCTGCCACTCAGTGCCGATTTTGATAACAAAAACCAGAAATTGAATCTTAGAACCATAATCATCATTGCTTTATCGTCCTTTGTACTCTTGCTGGTTTTGATTGGAGCATGTTTCGTAATTTTGAAATGGAGGAAGGTCGGGAAACCATCAAGTGCTGTTGGTCCTACATTCACTTCATCTATAAACAAGAGATCTGGCCTGGGGTCTATGTTATCTAGCAGTATTACAAGTTCGACATCAATGTCCCTTATGTCCACAATGCCTACATCCATTCTCTCTGCTAAAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAGGTTTAATTCAAAGAGGGTATTAGGAGAAGGAGGTTTTGGACGTGTTTATAGTGGGACACTGGAAGACGGGACTGAAGTTGCAGTCAAGATGCTAACAAGGGATAATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTGAAACTGATTGGTATATGCATTGATGGTCGCAAGCGTTGCTTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATCTGCATGGCGTTGACAAGAAGGATGAGCCACTAGATTGGGAAGCACGGATGAAAATTGCCCTTGGAGCTGCAAGAGGACTGGCCTATCTTCATGAGGATTCTAATCCTCGGGTGATTCACCGTGACTTTAAGGCTAGCAATGTGTTATTAGAAGTTGACTTTACCCCCAAGGTTTCTGATTTTGGATTGGCGAGAGAAGCAACCGAAGGAAGTCATATTTCTACACGGGTGATGGGAACTTTTGGGTATGTTGCTCCAGAATATGCAATGACAGGCCATTTACTTGTTAAAAGCGATGTATATAGCTTTGGTGTTGTGCTGCTAGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCCGAGGGACAGGAGAATCTCGTCACTTGGGCACGACCACTGTTGACGAGTAGAGAAGGTTTAGAACAACTAGTGGATCCATCTTTGTCCGGAACCTACAACTTTGATGACATGGCGAAGTTCGCTTCCATCGCTTCAATGTGCGTTCATCCAGAAGTCACTCACAGACCCTTTATGGGTGAAGTTGTGCAGGCCATTAAGTTCATATACAATGACACAAATCATGACACTTGTGGAGATTGTTTTAGCCTGAAGGACTCATCTGCTCATGAGTCTGATTATCGAGGCGGCAATCTCGCCCCTTCTGATAGCAGTTGGTGGAATGATGGAGGGTTAACTCCAAGATTAAATTACGGCGAACCATCTTTCATCACAATGGAATATAGTTCCGGCCCACTTGAAGTGGAAAACAGACAGTTTTCAACTTCAAGCTTGGTTGAAGATATATCTTTACCAATTTGGCATGGGAATATGTCAGGTCCCTTAAGAACAAACAGAAGCAAACCATCCCTATTTAGATTTACAGGAAGCAGGAGTGAACATGGTGGATTTTCGTCTAGGCGTGAATGGTGA 2304 0.4345 MLPPPPPPPPVTLPELHFSSLSFNSFFGYKKCRIVFSSSLPFSTFFSLHRSFSLSVSFISSERAKTWLVKPSSRPSLAPAPSPSYQGPSLTPRPRHYRHRGHHHSMTPYAVAPPPSKDQACVCMEPLTSTPYGSPCGCVFPMRVRLSLDIALYAVFPVMNELEIEVALGTYLGQSQVKIMGASADSQNQGRTVVDIYLVPLGEKFDDTTASLTSERFWHKKVPLNRSLFGDYTVVYLTYQGFPPSPPYGNYDGSDPSESPGGLPLSADFDNKNQKLNLRTIIIIALSSFVLLLVLIGACFVILKWRKVGKPSSAVGPTFTSSINKRSGLGSMLSSSITSSTSMSLMSTMPTSILSAKTFSLSELEKATDRFNSKRVLGEGGFGRVYSGTLEDGTEVAVKMLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIDGRKRCLVYELVHNGSVESHLHGVDKKDEPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPEGQENLVTWARPLLTSREGLEQLVDPSLSGTYNFDDMAKFASIASMCVHPEVTHRPFMGEVVQAIKFIYNDTNHDTCGDCFSLKDSSAHESDYRGGNLAPSDSSWWNDGGLTPRLNYGEPSFITMEYSSGPLEVENRQFSTSSLVEDISLPIWHGNMSGPLRTNRSKPSLFRFTGSRSEHGGFSSRREW 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1103 767 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1103 767 MobiDBLite consensus disorder prediction 72 110 - -
Lal11g1103 767 CDD STKc_IRAK 377 641 - -
Lal11g1103 767 SUPERFAMILY Protein kinase-like (PK-like) 355 642 IPR011009 -
Lal11g1103 767 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Lal11g1103 767 MobiDBLite consensus disorder prediction 743 767 - -
Lal11g1103 767 Gene3D Phosphorylase Kinase; domain 1 343 447 - -
Lal11g1103 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Lal11g1103 767 Pfam Protein tyrosine and serine/threonine kinase 373 641 IPR001245 GO:0004672|GO:0006468
Lal11g1103 767 PANTHER OS01G0750732 PROTEIN 41 767 - -
Lal11g1103 767 Gene3D Transferase(Phosphotransferase) domain 1 448 662 - -
Lal11g1103 767 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 41 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1103 Lal-Chr11 14714179 14719895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1103 120 759 Receptor kinase-like Gene Family AT5G56890 54.123 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal11g1103 PK_Tyr_Ser-Thr 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1103 - - gmx:100792309 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1103 11 14714179 14719895 Lal11g1103 11 14714179 14719895 ECH
Lal11g1103 11 14714179 14719895 Lal1g1869 1 20975844 20981618 LSH
Lal11g1103 11 14714179 14719895 Lal13g1063 13 7887133 7900693 PCT
Lal13g1063 13 7887133 7900693 Lal11g1103 11 14714179 14719895 PCT