Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal11g1103 | ATGCTCCCACCACCACCACCACCGCCACCGGTTACGTTGCCGGAGCTTCATTTCTCTTCCTTATCATTCAATTCGTTTTTTGGCTACAAAAAATGCAGAATTGTCTTTTCTTCTTCCTTGCCCTTTTCAACTTTCTTTTCTCTTCATCGGTCGTTTTCTCTGAGTGTATCATTCATTTCATCCGAACGAGCTAAAACATGGTTAGTTAAACCTTCTTCTAGACCATCTCTCGCACCAGCACCATCTCCATCTTATCAAGGTCCTAGCTTGACTCCAAGACCACGACATTATCGCCATCGTGGTCACCATCATAGCATGACACCTTATGCAGTGGCTCCACCCCCTTCAAAAGACCAAGCTTGTGTCTGTATGGAACCGCTCACATCAACTCCCTACGGTTCTCCTTGTGGATGTGTATTTCCCATGAGAGTCAGACTTTCACTGGATATAGCTCTTTATGCTGTTTTTCCAGTAATGAATGAGTTAGAGATTGAAGTTGCATTAGGCACATATTTAGGGCAAAGTCAGGTAAAGATAATGGGTGCCAGTGCTGACAGTCAAAACCAGGGAAGGACTGTTGTTGATATTTACTTGGTTCCTCTGGGAGAGAAATTTGATGATACCACTGCATCTCTGACATCTGAGAGGTTTTGGCACAAGAAAGTTCCTCTGAATAGGAGCCTTTTTGGTGATTATACTGTCGTGTACCTTACTTATCAAGGATTTCCACCATCACCACCATATGGAAATTATGATGGGAGTGATCCCAGTGAAAGTCCTGGTGGTCTGCCACTCAGTGCCGATTTTGATAACAAAAACCAGAAATTGAATCTTAGAACCATAATCATCATTGCTTTATCGTCCTTTGTACTCTTGCTGGTTTTGATTGGAGCATGTTTCGTAATTTTGAAATGGAGGAAGGTCGGGAAACCATCAAGTGCTGTTGGTCCTACATTCACTTCATCTATAAACAAGAGATCTGGCCTGGGGTCTATGTTATCTAGCAGTATTACAAGTTCGACATCAATGTCCCTTATGTCCACAATGCCTACATCCATTCTCTCTGCTAAAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAGGTTTAATTCAAAGAGGGTATTAGGAGAAGGAGGTTTTGGACGTGTTTATAGTGGGACACTGGAAGACGGGACTGAAGTTGCAGTCAAGATGCTAACAAGGGATAATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTGAAACTGATTGGTATATGCATTGATGGTCGCAAGCGTTGCTTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATCTGCATGGCGTTGACAAGAAGGATGAGCCACTAGATTGGGAAGCACGGATGAAAATTGCCCTTGGAGCTGCAAGAGGACTGGCCTATCTTCATGAGGATTCTAATCCTCGGGTGATTCACCGTGACTTTAAGGCTAGCAATGTGTTATTAGAAGTTGACTTTACCCCCAAGGTTTCTGATTTTGGATTGGCGAGAGAAGCAACCGAAGGAAGTCATATTTCTACACGGGTGATGGGAACTTTTGGGTATGTTGCTCCAGAATATGCAATGACAGGCCATTTACTTGTTAAAAGCGATGTATATAGCTTTGGTGTTGTGCTGCTAGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCCGAGGGACAGGAGAATCTCGTCACTTGGGCACGACCACTGTTGACGAGTAGAGAAGGTTTAGAACAACTAGTGGATCCATCTTTGTCCGGAACCTACAACTTTGATGACATGGCGAAGTTCGCTTCCATCGCTTCAATGTGCGTTCATCCAGAAGTCACTCACAGACCCTTTATGGGTGAAGTTGTGCAGGCCATTAAGTTCATATACAATGACACAAATCATGACACTTGTGGAGATTGTTTTAGCCTGAAGGACTCATCTGCTCATGAGTCTGATTATCGAGGCGGCAATCTCGCCCCTTCTGATAGCAGTTGGTGGAATGATGGAGGGTTAACTCCAAGATTAAATTACGGCGAACCATCTTTCATCACAATGGAATATAGTTCCGGCCCACTTGAAGTGGAAAACAGACAGTTTTCAACTTCAAGCTTGGTTGAAGATATATCTTTACCAATTTGGCATGGGAATATGTCAGGTCCCTTAAGAACAAACAGAAGCAAACCATCCCTATTTAGATTTACAGGAAGCAGGAGTGAACATGGTGGATTTTCGTCTAGGCGTGAATGGTGA | 2304 | 0.4345 | MLPPPPPPPPVTLPELHFSSLSFNSFFGYKKCRIVFSSSLPFSTFFSLHRSFSLSVSFISSERAKTWLVKPSSRPSLAPAPSPSYQGPSLTPRPRHYRHRGHHHSMTPYAVAPPPSKDQACVCMEPLTSTPYGSPCGCVFPMRVRLSLDIALYAVFPVMNELEIEVALGTYLGQSQVKIMGASADSQNQGRTVVDIYLVPLGEKFDDTTASLTSERFWHKKVPLNRSLFGDYTVVYLTYQGFPPSPPYGNYDGSDPSESPGGLPLSADFDNKNQKLNLRTIIIIALSSFVLLLVLIGACFVILKWRKVGKPSSAVGPTFTSSINKRSGLGSMLSSSITSSTSMSLMSTMPTSILSAKTFSLSELEKATDRFNSKRVLGEGGFGRVYSGTLEDGTEVAVKMLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIDGRKRCLVYELVHNGSVESHLHGVDKKDEPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPEGQENLVTWARPLLTSREGLEQLVDPSLSGTYNFDDMAKFASIASMCVHPEVTHRPFMGEVVQAIKFIYNDTNHDTCGDCFSLKDSSAHESDYRGGNLAPSDSSWWNDGGLTPRLNYGEPSFITMEYSSGPLEVENRQFSTSSLVEDISLPIWHGNMSGPLRTNRSKPSLFRFTGSRSEHGGFSSRREW | 767 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal11g1103 | 767 | ProSiteProfiles | Protein kinase domain profile. | 371 | 646 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal11g1103 | 767 | MobiDBLite | consensus disorder prediction | 72 | 110 | - | - | |
Lal11g1103 | 767 | CDD | STKc_IRAK | 377 | 641 | - | - | |
Lal11g1103 | 767 | SUPERFAMILY | Protein kinase-like (PK-like) | 355 | 642 | IPR011009 | - | |
Lal11g1103 | 767 | ProSitePatterns | Protein kinases ATP-binding region signature. | 377 | 399 | IPR017441 | GO:0005524 | |
Lal11g1103 | 767 | MobiDBLite | consensus disorder prediction | 743 | 767 | - | - | |
Lal11g1103 | 767 | Gene3D | Phosphorylase Kinase; domain 1 | 343 | 447 | - | - | |
Lal11g1103 | 767 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 494 | 506 | IPR008271 | GO:0004672|GO:0006468 | |
Lal11g1103 | 767 | Pfam | Protein tyrosine and serine/threonine kinase | 373 | 641 | IPR001245 | GO:0004672|GO:0006468 | |
Lal11g1103 | 767 | PANTHER | OS01G0750732 PROTEIN | 41 | 767 | - | - | |
Lal11g1103 | 767 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 662 | - | - | |
Lal11g1103 | 767 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 | 41 | 767 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal11g1103 | Lal-Chr11 | 14714179 | 14719895 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal11g1103 | 120 | 759 | Receptor kinase-like Gene Family | AT5G56890 | 54.123 | 0.0 | 625 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Lal11g1103 | PK_Tyr_Ser-Thr | 8.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal11g1103 | - | - | gmx:100792309 | 1117.83 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal11g1103 | 11 | 14714179 | 14719895 | Lal11g1103 | 11 | 14714179 | 14719895 | ECH | |
Lal11g1103 | 11 | 14714179 | 14719895 | Lal1g1869 | 1 | 20975844 | 20981618 | LSH | |
Lal11g1103 | 11 | 14714179 | 14719895 | Lal13g1063 | 13 | 7887133 | 7900693 | PCT | |
Lal13g1063 | 13 | 7887133 | 7900693 | Lal11g1103 | 11 | 14714179 | 14719895 | PCT |