Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1098 ATGGCTTCTACTCAAGGTCAAGTCATTACATGCAAAGCTGCGGTGGCCTGGGAACCCAATAAGCCTTTGACAATTGAAGATGTTGAGGTGGCGCCGCCGCAAGCCGGCGAGGTTCGTGTGAAAATACTTTTCACCGCTCTTTGTCACACCGATGCTTATACTTGGAGTGGCAAGGATCCGGAAGGTCTCTTCCCTTGTATTCTTGGCCACGAAGCTGCTGGGATTGTGGAAAGTGTCGGAGAGGGCGTTACTGAAGTTAAGCCTGGAGATCATGTCATCCCCTGTTATCAGGCTGAATGTGGAGAATGCAAGTTTTGCAAATCAGGAAAAACAAACCTTTGTGGCAAGGTTCGTTCTGCCACTGGAGTTGGGGTAATGCTCAATGACCGCAAGAGTCGTTTCTCTGTTAATGGAAAACCCATTTATCATTTTATGGGAACTTCCACATTCAGTCAATACACTGTTGTTCATGATGTCAGTGTAGCTAAGATTGACCCAATAGCTCCTCTGGAGAAGGTTTGCCTTCTCGGATGTGGTGTTCCAACTGGCCTTGGAGCTGTCTGGAACACTGCAAAAGTGGAACCAGGATCAAATGTTGCTATTTTTGGCCTTGGAACTGTTGGGCTTGCTGTTGCAGAGGGTGCAAAAGCTGCTGGTGCATCCCGGATTATTGGCATTGATATTGATAGCAAGAAGTTTGAAGTAGCTAAAAACTTTGGAGTCACTGAGTTTATCAATCCAAAGGAACACGAGAAACCTATCCAGCAGGTCATAGTTGATGAAACAGATGGTGGAGTTGATTATAGCTTTGAGTGCATTGGAAATGTCTCTGTGATGAGATCTGCTCTGGAGTGCTGCCACAAGGGTTGGGGGACATCAGTTATTGTAGGTGTTGCAGGATCGGGGCAGGAAATATCAACTCGCCCTTTCCAATTGGTGACTGGGCGTGTTTGGAAAGGAACAGCTTTTGGTGGCTTCAAGAGCAGGTCACAGGTGCCTTGGCTTGTAGAGAAGTACTTGAAGAAGGAAATCAAAGTTGATGAATACATAACCCACACATTGACTCTTGAGGAGATCAATAAGGCTTTTGATCTTTTGCATGAAGGAGGATGCCTACGTTGTGTGCTTGCTACAAATGCATGA 1143 0.4611 MASTQGQVITCKAAVAWEPNKPLTIEDVEVAPPQAGEVRVKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVKPGDHVIPCYQAECGECKFCKSGKTNLCGKVRSATGVGVMLNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPIAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFEVAKNFGVTEFINPKEHEKPIQQVIVDETDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAGSGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHTLTLEEINKAFDLLHEGGCLRCVLATNA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1098 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Lal11g1098 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Lal11g1098 380 Gene3D - 14 373 - -
Lal11g1098 380 CDD alcohol_DH_class_III 9 376 IPR014183 GO:0006069|GO:0008270|GO:0051903
Lal11g1098 380 SUPERFAMILY GroES-like 327 376 IPR011032 -
Lal11g1098 380 PANTHER S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE 4 379 - -
Lal11g1098 380 PANTHER ALCOHOL DEHYDROGENASE 4 379 - -
Lal11g1098 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Lal11g1098 380 Gene3D - 183 321 - -
Lal11g1098 380 SUPERFAMILY GroES-like 4 194 IPR011032 -
Lal11g1098 380 Pfam Zinc-binding dehydrogenase 207 329 IPR013149 -
Lal11g1098 380 TIGRFAM adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 11 376 IPR014183 GO:0006069|GO:0008270|GO:0051903
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1098 Lal-Chr11 14668489 14672808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1098 1 332 Monolignol Biosynthesis Gene Families AT1G72680 27.139 1.74e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1098 K00121 - bvg:104899321 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1098 11 14668489 14672808 Lal11g1098 11 14668489 14672808 ECH