Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1097 ATGGGGAGAAGGATTCTGAATCAAGCTCTCAGTGCTATGGTCAATGCTGAAAGGAGAGGTAAATCTACGGTTGAGATTAAACCTTCTTCCACTGTTATCTCTTCTTTTCTCCAAATCATGAAACACCGAGGCTATATCAAAGGCTTCCAAGTTAATGATCAACATAGAGTTGGGAAGATAACAGTTGAATTACAAGGTAGGATCAACAGTTGCAAAGCCATTACATACCGACAAGACATCAAAGCAAAGGATATTGAAGAGTACAAGTCACGTGCTCTCCCAACACGTCAGTGGGGTTATGTTGTGATTACAACTCCTGACGGCGTTTTGGATCATGAAGAGGCCATCAAAAGAAATGTAGGTGGCCAGGTTCTTGGTTACTTTCACTGA 390 0.4179 MGRRILNQALSAMVNAERRGKSTVEIKPSSTVISSFLQIMKHRGYIKGFQVNDQHRVGKITVELQGRINSCKAITYRQDIKAKDIEEYKSRALPTRQWGYVVITTPDGVLDHEEAIKRNVGGQVLGYFH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1097 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lal11g1097 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lal11g1097 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 1 129 - -
Lal11g1097 129 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lal11g1097 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lal11g1097 129 Gene3D - 69 129 - -
Lal11g1097 129 Gene3D - 2 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1097 Lal-Chr11 14664201 14666114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1097 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 76.744 8.36e-76 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1097 K02957 - zju:107419531 221.09