Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1095 ATGGCGGCATATACATGCTCGGCGGCAGACCTCAACTCCCTCCTCGGAAACACCACGAATGCGGCGGCCGCGGCCGAGTTCATATGTCAACGTTTTGATGCAATTTCAAACAAGTTCATTGACACAACATATGCCATTGACAATACTTACCTTCTTTTTTCTGCATACCTTGTGTTTTCCATGCAACTTGGTTTTGCAATGCTATGTGCTGGTTCCGTGCGTGCCAAGAATACTATGAATATAATGTTAACAAATGTTCTTGATGCTGCAACTGGTGGCATATTCTTTTACATATTTGGTTTTGCTTTAGCTTTTGGAACACCTTCAAATGGGTTCATTGGGAAACAATTCTTTGGCCTTAACAAGTTTCCTTCACCAAGTTTTGATTATGGCTATTTCCTTTACCAATGGGCTTTTGCCATTGCAGCTGCTGGAATTACAAGTGGTTCTATTGCTGAGAGGACACAGTTTGTTGCATATTTGATATACTCTTCATTCTTAACTGGTTTGGTGTATCCAATTGTGGCACATTGGTTTTGGTCTTCTGATGGTTGGGGTAGTCCTGCTAGGGCTGAAAATTTGTTGTTTGGTTCTGGTGTCATTGATTTTGCTGGCTCAGGTGTTGTTCATTTGGTTGGTGCTGTTGCTGGCTTCTGGGGTGCTATCATTGAAGGCCCTCGTATTGGAAGGTTCAACCATTCAGGTAAACCTGTCCCAATGAGAGGACATAGTGGTACATTGGTTGTTTTAGGCACATTCTTGTTGTGGTTTGGTTGGTATGGATTCAACCCTGGCTCATTCCTCAACATATTGAAGACATATGGAGACAGTGGCTCTTACTATGGGCAATGGAGTGCTATTGGGAGGACAGCAGTGACCACAACTCTTGCTGGATGCTCAGCAGCACTGACCACACTCTTCGGAAAACGCATACAAACCGGTCATTGGACCGTAACAGATGTGTGCAACGGTTTGCTTGGTGGGTTTGCTGCAATCACTGCAGGGTGTGCTTTTGTCGACCCTTGGGCTGCAATCATATGTGGGTTTGTGGCTGCTTGGGTTCTCATCGGATGCAACATTCTAGCCGAGAAGATCAAGTATGATGATCCACTTGAGGCTGCACAACTTCATGGAGGTTGTGGCATTTGGGGCATAATCTTCACTGCCTTGTTCGCCAAGAAACAATACGTTAACGAGATCTATCCAGGGTTACCTGATAGGCCTTATGGACTTTTGATGGGAGGGGGTGGAAAATTGTTAGCAGCACATGTTATGCAGATTTTGTCCATCATAGCTTGGGTGAGTGTTACAATGGGACTTGTGTTCTTTATACTTCACAAATTGAATCTATTGAGGACGCCACCCGAGGAAGAAATAGCGGGATTGGACTTAACAAGCCATGGTGGATTGGCATATGAGTATCATGAAGAGGCACAGAAACCTGAATTTGGGGCTGCATAG 1461 0.4463 MAAYTCSAADLNSLLGNTTNAAAAAEFICQRFDAISNKFIDTTYAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFALAFGTPSNGFIGKQFFGLNKFPSPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVAHWFWSSDGWGSPARAENLLFGSGVIDFAGSGVVHLVGAVAGFWGAIIEGPRIGRFNHSGKPVPMRGHSGTLVVLGTFLLWFGWYGFNPGSFLNILKTYGDSGSYYGQWSAIGRTAVTTTLAGCSAALTTLFGKRIQTGHWTVTDVCNGLLGGFAAITAGCAFVDPWAAIICGFVAAWVLIGCNILAEKIKYDDPLEAAQLHGGCGIWGIIFTALFAKKQYVNEIYPGLPDRPYGLLMGGGGKLLAAHVMQILSIIAWVSVTMGLVFFILHKLNLLRTPPEEEIAGLDLTSHGGLAYEYHEEAQKPEFGAA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1095 486 PANTHER AMMONIUM TRANSPORTER 2 480 - -
Lal11g1095 486 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lal11g1095 486 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lal11g1095 486 Gene3D Ammonium transporter AmtB like domains 26 484 IPR029020 -
Lal11g1095 486 SUPERFAMILY Ammonium transporter 44 452 - -
Lal11g1095 486 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lal11g1095 486 PANTHER AMMONIUM TRANSPORTER 2 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1095 Lal-Chr11 14633515 14635560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1095 2 480 Inorganic Solute Cotransporters AT4G28700 77.066 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1095 K03320 - jre:109020544 819.69