Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1088 ATGAAGATGCAAATGAAAACTCAGTTTTTCATATTCTTATTATGTTATATTGGTTGTTTCTCTTATGGTTTTGATGCTGATATAAATGATGAAGTATCAACTTTGCTTTCTATAAAGGCGAGTTTTGTTGATCCTTTAAACACACTGCAGAATTGGAAGGGTGCAGCACATTGTAATTGGACTGGTGTTTTGTGCAACTCGCATGGATTTGTAGAGAAGCTTGATCTTTCACACAAGAATCTCAGTGGCGTAGTATCCGATGAGATACAAAGGCTTAAAAATCTTACTTCTATAAACTTGAGTTGCAATGCTTTTTCATCGCCATTTCCGAAATCCATAACCAATCTCACCACACTGATGAGCCTTGATGTAAGTCAGAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAAGGCGTCGCGGCTTGTGGCCTTAAATGCATCGAGCAATGAGTTCTCGGGTTCACTTCCTTGGGACCTTGGAAATGTGTCTTCGTTGGAGATGCTGGATCTTAGAGGCAGCTTCTTTGAAGGGTCAATTCCAACATCATTCAGTGGCTTGCATGATTTGAAGTTCCTTGGTCTGTCGGGGAATAACCTCACTGGCAAAATTCCAAGTGTGCTTGGAAAACTTTCATCATTGGAGTACATGATCCTTGGATACAATGAATTTGAAGGTGGAATTCCAATTGAGTTTGGAAATCTCACCAATCTTAAGTATCTTGATTTAGCAGTAGCTAATCTTGGTGGTGAGATTCCATCTTCACTGGGAAAACTCAAGTTAGTGGATACAGTTTTCTTATACAACAACAACTTTGAAGGCAGAATTCCACCCGAAATCGGCAGTATGACTTCTTTGCAGTTTCTCGATCTATCCGATAACATGTTTTCAGGGAGAATTCCAGATGAAATAAGTGATTTGAAGAATTTGGAGCTACTCAACTTCATGCACAACAAGCTATCTGGTCCTGTTCCTTCTGGCCTTGGTGATTTGCCTCAACTTGAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGTCCATTGCCTAGTAATCTTGGCAAGAATTCACCACTGCAGTGGTTGGATGTATCATCCAATTCACTATCTGGTGAGATTCCAGAAACTCTTTGCAGCCGAGGCAACCTCACCAAGCTGATACTTTTCAACAATGCATTTTCTGGTTTGATTCCCACGAGCCTATCAACGTGTCCTTCACTTGTTCGCGTTCGAATTCATAACAATTTTCTTTCCGGGGCAGTTCCTGTTGGTCTTGGCAAGCTTGGGAGGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTCTCCGGTGGAATACCAGATGACCTTGCTTCTTCCACATCACTTTCTTTCATTGATTTCTCGAGAAATAAACTCCATTCTTCTCTTCCTTCCACTGTACTTTCCATTCCAAATCTTCAAGCTTTCATGGTCTCAAACAACAACTTGGAAGGTGAGATTCCGGATCAATTCCAGGATTGTCCCTCGCTCGCTGCTCTTGATCTTTCATCAAATCATTTCTCTGGAAGCATTCCAGCAAGCATAGCTTCATGTCAGAAGTTGGTGAACTTGAACCTACAAAACAACCAATTGAGTGGTGAAATTCCAAAGGCAATAGCTACCATGCCTACATTGGCCATTCTTGATGTTTCCAACAATTCTCTAACTGGCCAAATACCTGAAAGCTTTGGAATTTCTCCGGCTCTTGAAGCATTCAATGTCTCATACAATAAGCTTGAAGGTCCTATCCCATCAAATGGCATGCTTAGAACTATAAACCCAAATGATCTTGTAGGCAATTCTGGCCTATGTGGAGGTATCTTCCCACCATGTGGCCAAAACTATGCAGATTCATCAAGGCATGGAAGTTCACATGCAAAGCACATTATCACAGGATGGATCATTGGAATATCGTCAACTCTAGCCGTTGGGATTGGAATTGTGGTGGCAAGATCCTTATACATAAGGTGGTATACTGATGGATTCTGCTTCCAAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATAGCATTTCAAAGGCTTGATTTTACAAGTACCGACATTCTATCTTGCATCAAAGAAACTAATGTGATCGGAATGGGAGCGACCGGGGTTGTTTATAAGGCTGAGATACCACACTCAACAACTGTTGTGGCAGTGAAGAAATTGTGGAGATCAGGATCTGATGTTGAAGTAGGAACAAACAATGATGAGGTTGTTGGAGAGGTTGATGTATTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTATTAGGATCTCTTCACAACAACACTGATGTGATGATACTTTATGAGTTTATGCACAATGGAAACCTTGGCGATGCCTTGCATAGCAAGCGAGCGACACAATTGCTTGTAGACTGGGTTTCGCGGTATAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGACTGTAATCCACCGGTTATCCATCGAGATATCAAATCGAATAATATATTGCTTGATGCAAACCTGGAGGCAAGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCAGGAAGAATGAAACTGTCTCCATGATTGCTGGATCCTATGGCTACATTGCCCCTGAATATGGATATGCCTTGAAGGTGGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTATTGGAGCTTCTAACAGGAAAGAGGCCATCAGATGCAGAGTTTGGAGAGTCAATAGAAATTGTAGAGTGGATTAGAAAGAAGATTAGAGACAACAAATCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACAATAGGCATGTCCTAGAAGAGATGCTTTTAGTACTAAGAATAGCAGTTCTTTGCACTGCCAAGTTCCCAAAGGATAGACCAACCATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTAGGAGAAAGAGCAGTGGCAATAATGAATCTAACAACAACAAAGAGATGCCAGTTTTTGATGCATCACCAGTTAATGACCTTGTCTAG 3039 0.4113 MKMQMKTQFFIFLLCYIGCFSYGFDADINDEVSTLLSIKASFVDPLNTLQNWKGAAHCNWTGVLCNSHGFVEKLDLSHKNLSGVVSDEIQRLKNLTSINLSCNAFSSPFPKSITNLTTLMSLDVSQNFFIGDFPLGLGKASRLVALNASSNEFSGSLPWDLGNVSSLEMLDLRGSFFEGSIPTSFSGLHDLKFLGLSGNNLTGKIPSVLGKLSSLEYMILGYNEFEGGIPIEFGNLTNLKYLDLAVANLGGEIPSSLGKLKLVDTVFLYNNNFEGRIPPEIGSMTSLQFLDLSDNMFSGRIPDEISDLKNLELLNFMHNKLSGPVPSGLGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCSRGNLTKLILFNNAFSGLIPTSLSTCPSLVRVRIHNNFLSGAVPVGLGKLGRLQRLELANNSLSGGIPDDLASSTSLSFIDFSRNKLHSSLPSTVLSIPNLQAFMVSNNNLEGEIPDQFQDCPSLAALDLSSNHFSGSIPASIASCQKLVNLNLQNNQLSGEIPKAIATMPTLAILDVSNNSLTGQIPESFGISPALEAFNVSYNKLEGPIPSNGMLRTINPNDLVGNSGLCGGIFPPCGQNYADSSRHGSSHAKHIITGWIIGISSTLAVGIGIVVARSLYIRWYTDGFCFQERFYKGSKGWPWRLIAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEIPHSTTVVAVKKLWRSGSDVEVGTNNDEVVGEVDVLGRLRHRNIVRLLGSLHNNTDVMILYEFMHNGNLGDALHSKRATQLLVDWVSRYNIALGVAQGLAYLHHDCNPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPSDAEFGESIEIVEWIRKKIRDNKSLEEALDPSVGNNRHVLEEMLLVLRIAVLCTAKFPKDRPTMRDVIMMLGEAKPRRKSSGNNESNNNKEMPVFDASPVNDLV 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1088 1012 Pfam Protein kinase domain 704 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1088 1012 MobiDBLite consensus disorder prediction 980 1012 - -
Lal11g1088 1012 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Lal11g1088 1012 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Lal11g1088 1012 ProSiteProfiles Protein kinase domain profile. 702 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1088 1012 Gene3D Ribonuclease Inhibitor 194 263 IPR032675 -
Lal11g1088 1012 Gene3D Ribonuclease Inhibitor 264 328 IPR032675 -
Lal11g1088 1012 Gene3D Ribonuclease Inhibitor 329 625 IPR032675 -
Lal11g1088 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Lal11g1088 1012 SUPERFAMILY L domain-like 56 303 - -
Lal11g1088 1012 SUPERFAMILY Protein kinase-like (PK-like) 694 979 IPR011009 -
Lal11g1088 1012 Pfam Leucine rich repeat 477 537 IPR001611 GO:0005515
Lal11g1088 1012 Gene3D Transferase(Phosphotransferase) domain 1 788 1006 - -
Lal11g1088 1012 Gene3D Phosphorylase Kinase; domain 1 702 787 - -
Lal11g1088 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 991 - -
Lal11g1088 1012 SMART serkin_6 702 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1088 1012 SUPERFAMILY RNI-like 253 593 - -
Lal11g1088 1012 ProSitePatterns Protein kinases ATP-binding region signature. 708 732 IPR017441 GO:0005524
Lal11g1088 1012 SMART LRR_typ_2 428 452 IPR003591 -
Lal11g1088 1012 SMART LRR_typ_2 188 212 IPR003591 -
Lal11g1088 1012 SMART LRR_typ_2 332 356 IPR003591 -
Lal11g1088 1012 SMART LRR_typ_2 236 260 IPR003591 -
Lal11g1088 1012 SMART LRR_typ_2 476 499 IPR003591 -
Lal11g1088 1012 SMART LRR_typ_2 284 308 IPR003591 -
Lal11g1088 1012 PANTHER UNNAMED PRODUCT 11 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1088 Lal-Chr11 14558881 14562665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1088 5 1012 Receptor kinase-like Gene Family AT1G08590 59.034 0.0 1167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal11g1088 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1088 - - gmx:100811284 1691.01