Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1087 ATGCACATGATCCAAGGTTCTTCTTCTTCTTCTTCTTCTTCCATGTACTCAACTCTTTCTAAAGATGACAACTTTGTCTTCTTCTCTGAGGATTCTTCATGCCCAGATCACTCTAACCTTCATTTGGGTCTTGCCTTAACCCTTTCTCCTTCTCCAATTCCTCTATATGCTAGAATTTTGACTTCTAAGGATTTCCCTTCTTCATCAGCTTCATCTTCTTCATCTTCTTCTTCTTTAAATAGAAAGAGTAATGTCACTTCTGGGAATAAGAGAGTTGCTGATTCTGTTGTCTCCACCAATGGTTCCGGACAGGTGGTTGGATGGCCTCCCCTTAGAACATATAGAATGAATAGCCTTAATCACAATTCAAAATTACCAGATGCCGAAGTAATCAAATATATGGTTGACAAAAGTAAAAGCAATATTGCTGTGGAAAGTAGCAGTGATAAAAGCATTACTGCCAAACAAAAAGAAAACCTCAGGAGTTCCTTGTTTGTGAAGGTAAATAAGGATGGCACGCCGATTGGAAGGAAGATTGACTTGAGTGCTTATAGTTCCTATGAAACCTTAGCTCGAACGTTGGAAGATATGTTTAATGAACCAACTACTGTCACCACTTGCAAAGGATCAAATGGAGAGGGTCATGGCATTACCGCTGGAATGGATGGGCAATCAAAATTGTTGGATGGATCTTCCAATTTTGTGCTCACTTATGAAGACGGGGAAGGGGACTGGATGCTTGTTGGAGATGTTCCTTGGTGGATGTTCCTTAGCTCTGTCAGAAGGCTAAGAATCATGAGAACATATAAGACTAATGGACTTGCACCAAGATTTGAAGAAAAGAGCAGAAGATTGAAAAACAAGCCCATATAG 873 0.3998 MHMIQGSSSSSSSSMYSTLSKDDNFVFFSEDSSCPDHSNLHLGLALTLSPSPIPLYARILTSKDFPSSSASSSSSSSSLNRKSNVTSGNKRVADSVVSTNGSGQVVGWPPLRTYRMNSLNHNSKLPDAEVIKYMVDKSKSNIAVESSSDKSITAKQKENLRSSLFVKVNKDGTPIGRKIDLSAYSSYETLARTLEDMFNEPTTVTTCKGSNGEGHGITAGMDGQSKLLDGSSNFVLTYEDGEGDWMLVGDVPWWMFLSSVRRLRIMRTYKTNGLAPRFEEKSRRLKNKPI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1087 290 MobiDBLite consensus disorder prediction 67 96 - -
Lal11g1087 290 Gene3D - 157 279 - -
Lal11g1087 290 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 280 IPR003311 GO:0005634|GO:0006355
Lal11g1087 290 ProSiteProfiles PB1 domain profile. 163 270 IPR000270 GO:0005515
Lal11g1087 290 SUPERFAMILY CAD & PB1 domains 158 266 - -
Lal11g1087 290 Pfam AUX/IAA family 63 277 IPR033389 -
Lal11g1087 290 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 19 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1087 Lal-Chr11 14554354 14558639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1087 145 277 B3 DNA Binding Superfamily AT1G59750 30.827 5.87e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Lal11g1087 AUX_IAA 2.1e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1087 K14484 - gmx:100779400 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1087 11 14554354 14558639 Lal11g1087 11 14554354 14558639 ECH