Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1083 ATGGCACGCAATCCAAAAGTGGTAGCGGCCTATAGCGCAATGGCAAATCTCGGGATCCATGTATCAAAAGTGAAGCCAGTACTGAAGAAACTTCTTAAGTTGTATGATAAGAACTGGGAACTGATTGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGATGAAAATAAGGTACCAGAGTCGGAGCCGGAGCCGGTTCATAAAAAGAAAAACAAGAGAGTTGGTGAAGGAAGGGCAGATGATGAAGAAGCTCATCTGCAAGATGAGCCATTGCAACCTTTGAAGAGGTCGCGTTTTAGAGGTCAAGAGACTCAATCTTTGCATCCTCCGTCTAGCTCTGGCCCCAGCTCAGCTGCCTATCCATTGAAAATTCCTAAATTAGAAGATGGGACAGTACCTGAAAGTAGTTACGGACAGCAGCATCAAAGCACAGCAGTTTTATCTGATGGAAATGCACAAAACGAAACACACCAACTTCCACAACGTGATGGTATTGTTGATAAGGGAAAGCAACCTGTATCACCTCATGTTACTTATAGAAGGAGAAGGCTTACATCTGAAAGAGCACCCCCAGCAGTACCCTTGATCATACCAAAGGATGAGCCCGTCGATGACATGCCAAAGTTTGCAGTCCCCCTTGCAATGATTCTTCCTGAACAATCAAGTGGAAGGGACTATTCAATTGATAATGGTGCATCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCCATGCAGAGATGGTGAAGTTGGAGCACAAGATATTCTTCCTCCCTCACATGAAGTAGCGGCTTCTAATGTTGAAATAGCTTCACCAGCTCTGGGAGAGGTAAATGCAGCTGAAAAGCAAGATGGTCATGACACAGTGGCATTGCCATGCAGAGATGGAGAAGCTGGAGCTCAAGATATTCTTCCTTCCTCACATGAAGAAGTCCCTTCTAATGTTGAGATAGCTTCGTCAGCTGTGGGAGAGGTAACTGCAGCTGAAAAGCAAGATGGCCATGACACAGTGGCATTGCATAGCAGAGATGGAGAAGTTGGAGGTGAAGATATTCAACTTTCTTCGCATGAAGAACCAGCTTCTAATGTTGAGATAAACTTGTCTGCTATGGGAGAGGAAGGAACTGTTATGATAACACCATCTGTTAACGTGTCAATGGAGCCTGATGAATTTGAGACCCTGCTTGTCAAAGGAAATAAAGATTCTGTGATGCCTTGCATTTCAAATGGATCGATCAATGATTTATCTTCCGCTGACATGGTGGCACCACAAATTCCCGATTCTAAACCCTACCCAAGTGGTCTGGATGATGCTGTACCAGTTTCCAAGAAGGTCGGAACTAATGATTTCATTGAAAGTGATGATGGAAAGGAGTTGGTGGATGCTGTATATCCTAATTCACCCAGTTTAACGCTTGTTTCGAAGCATCATCCTACAACTGAAATAAGGACTTGTCAAGATGTTAATGACCTAACGAAGGGAGAAGAGAATGTGAAAATTTCATGGGTGAATAATACTAGTACTGATTGCCCACCGCCTTTTCACTACGTACGCCGGAGTGTTGTGTTCCGGGATGCTCATGTCAAGATTTCTCTATCTCGTATTGGAAATGAGGATTGTTGTTCAACTTGTATGGGCAATTGTGTATTGTCATCAAAACCTTGTTTTTGTGCTAATAAAACTGGGGGTGAATTTGCATATACTGCACAAGGCCTACTGAAGGAAGAGTTCTTGAAAGATTGTATTGCCATCAGCCACCACCCTCAAAATTATTATTATTGCAAAGACTGCCCGCTTGAAAGATCAATGAGTGATGGTTGTTTAGAACCATGTAAAGGACATTTAAAGCGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGTTGTGGGAAACAATGTGGCAATCGTGTTATTCAGCGAGGAATAACTTGCAAATTGGAGGTGTTTTTAACATTAGATGGAAAAGGGTGGGGTCTTCGCACCTTGGAGGACCTTCCACAAGGGGCATTTGTATGTGAGTTTGTTGGAGAAATTTTAACTGTCAAAGAGTTGCATGGGAGGAACTTAAAATATCCCAAAACTGGGAAATGTACCTACCCAGTTCTATTGGATGCAAATTGGGATTCGAGAGTTATGGAGGATAAAGAAGCTCTTTGCTTGGATGCAGGATCATATGGAAATGCTGCAAGGTTCATTAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGTGCCCCGAACATCACTACTATCATCTTGCCTTCTTCACATCCAGAGAAATAGCTGCACAAGAAGAGCTTACTTGGGATTATGGCATAAACTTTGATGATCAAGATCAACCTTTTGAGCTGTTCCGGTGCAGATGTGGCAGTAAATTCTGCAGGAACATGAAACGATCAAATAGATCCACTAGATCATCAATTGCAAGATGA 2463 0.4271 MARNPKVVAAYSAMANLGIHVSKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEDENKVPESEPEPVHKKKNKRVGEGRADDEEAHLQDEPLQPLKRSRFRGQETQSLHPPSSSGPSSAAYPLKIPKLEDGTVPESSYGQQHQSTAVLSDGNAQNETHQLPQRDGIVDKGKQPVSPHVTYRRRRLTSERAPPAVPLIIPKDEPVDDMPKFAVPLAMILPEQSSGRDYSIDNGASEKQDGHDTVALPCRDGEVGAQDILPPSHEVAASNVEIASPALGEVNAAEKQDGHDTVALPCRDGEAGAQDILPSSHEEVPSNVEIASSAVGEVTAAEKQDGHDTVALHSRDGEVGGEDIQLSSHEEPASNVEINLSAMGEEGTVMITPSVNVSMEPDEFETLLVKGNKDSVMPCISNGSINDLSSADMVAPQIPDSKPYPSGLDDAVPVSKKVGTNDFIESDDGKELVDAVYPNSPSLTLVSKHHPTTEIRTCQDVNDLTKGEENVKISWVNNTSTDCPPPFHYVRRSVVFRDAHVKISLSRIGNEDCCSTCMGNCVLSSKPCFCANKTGGEFAYTAQGLLKEEFLKDCIAISHHPQNYYYCKDCPLERSMSDGCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITCKLEVFLTLDGKGWGLRTLEDLPQGAFVCEFVGEILTVKELHGRNLKYPKTGKCTYPVLLDANWDSRVMEDKEALCLDAGSYGNAARFINHRCFDANLVEIPVEVECPEHHYYHLAFFTSREIAAQEELTWDYGINFDDQDQPFELFRCRCGSKFCRNMKRSNRSTRSSIAR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1083 820 SMART preset_2 493 633 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal11g1083 820 MobiDBLite consensus disorder prediction 58 100 - -
Lal11g1083 820 Gene3D SET domain 496 807 IPR046341 -
Lal11g1083 820 MobiDBLite consensus disorder prediction 137 164 - -
Lal11g1083 820 MobiDBLite consensus disorder prediction 102 122 - -
Lal11g1083 820 MobiDBLite consensus disorder prediction 58 189 - -
Lal11g1083 820 Pfam SET domain 661 782 IPR001214 GO:0005515
Lal11g1083 820 ProSiteProfiles Pre-SET domain profile. 545 646 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal11g1083 820 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 282 - -
Lal11g1083 820 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 331 818 - -
Lal11g1083 820 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 282 330 - -
Lal11g1083 820 ProSiteProfiles SET domain profile. 649 782 IPR001214 GO:0005515
Lal11g1083 820 Gene3D - 1 60 IPR043017 -
Lal11g1083 820 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 820 IPR025776 -
Lal11g1083 820 CDD SET_SETDB-like 517 782 - -
Lal11g1083 820 SUPERFAMILY SET domain 487 788 IPR046341 -
Lal11g1083 820 Pfam Pre-SET motif 497 641 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal11g1083 820 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
Lal11g1083 820 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 282 330 - -
Lal11g1083 820 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 331 818 - -
Lal11g1083 820 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 282 - -
Lal11g1083 820 SMART set_7 649 788 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1083 Lal-Chr11 14503762 14511761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1083 625 807 C2H2 Transcription Factor Family AT2G23740 42.703 4.28e-33 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal11g1083 Pre-SET 6.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1083 - - vun:114190802 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1083 11 14503762 14511761 Lal11g1083 11 14503762 14511761 ECH
Lal12g0860 12 7027892 7035647 Lal11g1083 11 14503762 14511761 PCT
Lal13g0718 13 4693629 4697698 Lal11g1083 11 14503762 14511761 PCT