Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1081 ATGTCTAAGCGAGGTAGGGGAGGATCTGCGGGCAACAAGTTTCGAATGTCGCTGGGTCTTCCGGTGGCGGCGACGGTGAACTGCGCTGACAACACCGGCGCGAAGAATCTATACATAATTTCAGTGAAAGGGATCAAAGGTCGTTTGAATCGTTTACCTTCCGCTTGCGTAGGTGATATGGTAATGGCTACAGTGAAGAAAGGAAAACCAGATCTGCGTAAGAAGGTCCTTCCAGCTGTTATTGTTAGACAGCGTAAACCTTGGCGCCGAAAGGACGGTGTTTTCATGTACTTTGAAGATAATGCTGGTGTTATTGTGAATCCCAAGGGTGAAATGAAAGGTTCTGCTATCACTGGCCCAATTGGAAAGGAGTGTGCTGATCTGTGGCCTAGAATTGCAAGTGCAGCCAATGCTATTGTTTAA 423 0.4728 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1081 140 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal11g1081 140 Pfam Ribosomal protein L14p/L23e 22 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal11g1081 140 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lal11g1081 140 PANTHER 60S RIBOSOMAL PROTEIN L23 1 140 - -
Lal11g1081 140 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal11g1081 140 SUPERFAMILY Ribosomal protein L14 11 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lal11g1081 140 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal11g1081 140 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1081 Lal-Chr11 14493206 14501837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1081 1 140 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 98.571 3.01e-99 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1081 K02894 - zju:107434236 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1081 11 14493206 14501837 Lal11g1081 11 14493206 14501837 ECH
Lal11g1081 11 14493206 14501837 Lal1g1875 1 21052779 21054571 LSH
Lal11g1081 11 14493206 14501837 Lal12g0858 12 7022448 7024295 PCT
Lal11g1081 11 14493206 14501837 Lal13g1052 13 7789480 7791532 PCT
Lal11g1081 11 14493206 14501837 Lal24g0800 24 6303255 6305260 PCT
Lal12g0858 12 7022448 7024295 Lal11g1081 11 14493206 14501837 PCT
Lal13g1052 13 7789480 7791532 Lal11g1081 11 14493206 14501837 PCT
Lal24g0800 24 6303255 6305260 Lal11g1081 11 14493206 14501837 PCT