Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1075 ATGACAACTATTGAAAAAGCTCATGCTATTCTCTTTCATATACTTCTCATATCTTCACTTCCAATGAAAAAAACTACAGCCTCAACAAGAACAGAAGCAGAAGCACTTGTGAAATGGAAAAACACTCTTTCTCTTCCTCTTCATCCTTCCATAGCTTCTTGGTCACTCAACAACTTTGCCAACTTTTGCAGCTGGGATGCTATTCTCTGTGACAACACCAATTCAAGTGTCACAAACATAAACTTATCTGGTTTCAATGTCACTGGAACTCTCTTTGACTTTGCTTTTGATTCCTTCCCAAATCTCACTAGTCTCAATCTCAACGGAAATAGTCTTGGAGGGTCAATACCATCTTCAATTGGCAGCCTCTCCAAGCTCACTTTTTTGGACTTAGGAAACAACTTTTTTGAGGACACATTACCTTCTGAGTTAGGACACTTGAAGGAGCTTGAATACCTTAGTTTTTATTTCAACAGTCTCAATGGTATATTTCCTTATCAAATCACAAATCTTCCTAAGGTAAGGTACTTAGACCTTGGATCAAATTACTTAATATCTCCTTCTTCATGGTCCTTATATTCAGGCATGCATTCCTTAACTTACCTTGGTTTGGATATCAATGAATTCGCTTCTGAAATCCCGAGTTTTATATCGGATTGCGAAAACTTGACATACCTTGACCTCTCTCAAAACCATTTCAATGGGACAATACCAGAATCTATGTATGCCAATCTAGGGAAGCTTGAATATCTCAACCTCACCAACTGTTTCCTAGAAGGACAATTGTCACCAAACTTGTCCAAGCTTTCAAATCTCAAAGAACTTCGCATAGGTAGTAACAAGTTTACTGGTTCTATTCCGAAAGAAATAGGACTAATATCTAGGCTTCGATTACTTGAACTGAATAACATGTCAGCACAAGGAGAAATTCCTTCCTCCTTAGGCCAACTTAGGGAGCTAAGTTATCTTGATCTCAGTCATAATTTTTTGAACTCTACAATTCCTTTTGAACTTGGATTTTGTACAAATCTAACTTACCTAAGTTTAGCAGTGAATGATCTTAGTGGTGAATTGCCTTTGTCACTATCTAATCTGTCCAAAATATCAATGTTGGGATTATCAGAAAATTCATTTTCTGGCGAAGTTTCTGATTCATTGATCTCTAATTGGACTGAGTTGATCTCTTTGCAAGTCCAAAACAATAATTTTACAGGAGAGGTTCCTCTAGAGATTGGCCTGTTGACAAAAATCCAAATCCTCTTTTTGTATAATAATACATTCTCTGGTCATATTCCTGAAGAGATTGGAAACCTGAAAGAAATGACCGAGTTAGACCTTTCAGGAAACCGATTCTCTGGTCGAATTCCTCTAACCATTTGGAATCTTAGAAACCTTATTGTCTTGAATCTTTTCTTCAATGAACTCTCAGGAAGCATTCCAACTGATATTGGAAACTTAACCTCAATACAAATTTTTGATGTCAACAACAATAATCTGCACGGAGAGTTACCAGAGACGATTGCTCGACTAAATAGTTTAGCATATTTTTCGGTGTTCAGTAATAACTTTTCGGGCAACATTCCCAGTGATTTTGGAAAGCATAGTCCAACATTGTCTCGCATATACTTTTCAAACAACAACTTCACAGGAGAATTGCCTTATGACTTGTGCAGTGGTAACATGCTAACTTTTTTGGCAGTCACTAATAACAGCTTTTCTGGGCCATTGCCGAAGTCCTTAAGAAATTGCTCAACACTAATTAGAGTTAGGCTCGATGAAAACCAATTCACCGGAAACATCACAGAGGTATTCGGGGTTTATCCGGATCTTAGTTTTATCTCAGTGAGTGGAAATCAGCTTACTGGTGAGCTCTCTCCTCAATGGGGTGAATGTGTCAACTTAACTCGGATGGAAATGAACAGAAATCAACTTTCTGGAAAAATTCCGTCTGAGTTGAGTAAGTTGAGTGAATTGCAATATCTAAGCCTGTATTCCAATGAATTCAGTGGCAATATCCCACCTGAAATTGGGAACTTAAGCCTGCTCTACATGTTCAACTTGAGCAGGAACCATTTCTCTGGAGAAATCCCTGAGAGTTTCGGCAGATTGGCTGAGCTTAATGATCTCGATTTATCAGATAATGACTTCAGTGGAGGTATTCCTAAAGAGCTCAGTAATTGCGATCGAATACTGAGCCTGAATTTAAGCCATAACAAACTCTCTGGGGAGATACCATATGAACTTGGTAATTTGTTTGCACTTCAATACTTGTTAGACCTCAGTAGCAACTCTTTTACTGGGGAAATTCCCGAAAACCTCGGCAAACTTGCATCATTGCAGATTCTCAATGTCTCACACAACAATCTTTCAGGGACAATTCCAAAATCCTTGTCAAGTATGTCCAGCCTTCAGTCTGTTGATTTTTCTTACAACAACTTGACAGGTTCAGTCCCAACTGATGGTATTTTCAAAACAACAAAAGCTGAAGCTTATGTTGGAAACTCCTTGTGTGGTGTGGTTAAAGGATTAACTCCTTGCAACAAAGTATCTTCCAAAGACAAATCAGGAGGAGTTAACAAAAAGGTTCTTCTTGGTGTTCTTATACCTGTTTTCGGGGTACTATTTATTACTGTTGTTGTAATCCTCATATTCCGACGGCAATCCAAGCTCTGTGATGAAGAGTCCAAAAGCACTCAAAATAGTGATCAGCCTATTAGCATGGTATGGGGAAAAGATGGAAAATTCACATTTTCTGAACTTGTTAAGGCCACTGAAGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTACAAAGCAGAATTACTTTCAGGTCAAGTAGTTGCTGTTAAAAGACTCAATATCTCAGACTCTGATGACATTCCTGCAGCGAACCGTCAGAGTTTTGAGAATGAGATACAATCACTTACAGGAGCCAGACACCGCAATATAATAAAGCTTTATGGATTCTGTTTGTGGAGGAAACAAATGTTCTTGGCTTACCAATATATAGAAAGAGGAAGTTTGAGAAATGTGCTGTATGCAGATGAAGGGAAGTTGGAGCTAAGTTGGGTCAGAAGAGTGAAAATTGTGCAGGGAATAGCACATGCAATTTCCTATCTGCATAGTGATTGCTCTCCACCAATTGTACACAGAGATGTAACATTGAATAACATACTATTGGACTCAGATTTCGAACCTCGGCTTGCTGATTTCGGCACAGCAAAGCTTCTAACTTCCAACACTTCAAGCTGGACTTCAGTGGCAGGCTCTTATGGCTACATGGCTCCAGAGTTAGCACAAACTATGAGGGTTACAGACAAGTGTGATGTGTATAGTTTTGGAGTGGTGGTATTAGAGATAATGATGGGAAAGCACCCTGGGGAATTCTTGATTACCATGTCTTCGAACAAGTCTTTGTCATCAATGGAAGATCCACAAATGCTTCTGAAGGATGTGCTGGACCAAAGGCTTCCACTTCCAAAAGGCCAATTAGCTGAAATAGTGGTGTTCATAATGACCATTGCTTTGGCGTGCACCCGTGCAGCTCCCGAATCTAGACCCGTGATGCGTGCTGTGGCGCAAGAACTATCTGCTACTACACAAGCTTGTCTTTCTGAACCATTTGGCATGATAACCATGGACAAGCTTACAGGGTTTCAGAAATAG 3681 0.3928 MTTIEKAHAILFHILLISSLPMKKTTASTRTEAEALVKWKNTLSLPLHPSIASWSLNNFANFCSWDAILCDNTNSSVTNINLSGFNVTGTLFDFAFDSFPNLTSLNLNGNSLGGSIPSSIGSLSKLTFLDLGNNFFEDTLPSELGHLKELEYLSFYFNSLNGIFPYQITNLPKVRYLDLGSNYLISPSSWSLYSGMHSLTYLGLDINEFASEIPSFISDCENLTYLDLSQNHFNGTIPESMYANLGKLEYLNLTNCFLEGQLSPNLSKLSNLKELRIGSNKFTGSIPKEIGLISRLRLLELNNMSAQGEIPSSLGQLRELSYLDLSHNFLNSTIPFELGFCTNLTYLSLAVNDLSGELPLSLSNLSKISMLGLSENSFSGEVSDSLISNWTELISLQVQNNNFTGEVPLEIGLLTKIQILFLYNNTFSGHIPEEIGNLKEMTELDLSGNRFSGRIPLTIWNLRNLIVLNLFFNELSGSIPTDIGNLTSIQIFDVNNNNLHGELPETIARLNSLAYFSVFSNNFSGNIPSDFGKHSPTLSRIYFSNNNFTGELPYDLCSGNMLTFLAVTNNSFSGPLPKSLRNCSTLIRVRLDENQFTGNITEVFGVYPDLSFISVSGNQLTGELSPQWGECVNLTRMEMNRNQLSGKIPSELSKLSELQYLSLYSNEFSGNIPPEIGNLSLLYMFNLSRNHFSGEIPESFGRLAELNDLDLSDNDFSGGIPKELSNCDRILSLNLSHNKLSGEIPYELGNLFALQYLLDLSSNSFTGEIPENLGKLASLQILNVSHNNLSGTIPKSLSSMSSLQSVDFSYNNLTGSVPTDGIFKTTKAEAYVGNSLCGVVKGLTPCNKVSSKDKSGGVNKKVLLGVLIPVFGVLFITVVVILIFRRQSKLCDEESKSTQNSDQPISMVWGKDGKFTFSELVKATEDFNDKYCIGKGGFGSVYKAELLSGQVVAVKRLNISDSDDIPAANRQSFENEIQSLTGARHRNIIKLYGFCLWRKQMFLAYQYIERGSLRNVLYADEGKLELSWVRRVKIVQGIAHAISYLHSDCSPPIVHRDVTLNNILLDSDFEPRLADFGTAKLLTSNTSSWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVVLEIMMGKHPGEFLITMSSNKSLSSMEDPQMLLKDVLDQRLPLPKGQLAEIVVFIMTIALACTRAAPESRPVMRAVAQELSATTQACLSEPFGMITMDKLTGFQK 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1075 1226 SUPERFAMILY L domain-like 61 381 - -
Lal11g1075 1226 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Lal11g1075 1226 SUPERFAMILY RNI-like 286 621 - -
Lal11g1075 1226 CDD STKc_IRAK 933 1201 - -
Lal11g1075 1226 ProSiteProfiles Protein kinase domain profile. 927 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1075 1226 Gene3D Transferase(Phosphotransferase) domain 1 1008 1211 - -
Lal11g1075 1226 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Lal11g1075 1226 Pfam Protein kinase domain 929 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1075 1226 SUPERFAMILY Protein kinase-like (PK-like) 903 1201 IPR011009 -
Lal11g1075 1226 SUPERFAMILY L domain-like 580 837 - -
Lal11g1075 1226 ProSitePatterns Protein kinases ATP-binding region signature. 933 955 IPR017441 GO:0005524
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 280 419 - -
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 1202 - -
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 169 383 - -
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 30 176 - -
Lal11g1075 1226 Pfam Leucine Rich Repeat 101 123 IPR001611 GO:0005515
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 30 176 - -
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 280 419 - -
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 169 383 - -
Lal11g1075 1226 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 1202 - -
Lal11g1075 1226 Gene3D Ribonuclease Inhibitor 194 481 IPR032675 -
Lal11g1075 1226 Gene3D Phosphorylase Kinase; domain 1 888 1007 - -
Lal11g1075 1226 Pfam Leucine rich repeat 198 256 IPR001611 GO:0005515
Lal11g1075 1226 Pfam Leucine rich repeat 758 813 IPR001611 GO:0005515
Lal11g1075 1226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1053 1065 IPR008266 GO:0004672|GO:0006468
Lal11g1075 1226 Gene3D Ribonuclease Inhibitor 483 850 IPR032675 -
Lal11g1075 1226 SMART LRR_typ_2 123 147 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 414 438 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 776 800 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 99 122 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 269 293 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 703 727 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 196 220 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 462 486 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 655 679 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 221 244 IPR003591 -
Lal11g1075 1226 SMART LRR_typ_2 317 341 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1075 Lal-Chr11 14391108 14395121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1075 1 649 Receptor kinase-like Gene Family AT4G08850 32.466 1.59e-84 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal11g1075 Pkinase 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1075 - - gmx:100809137 1756.5