Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1069 ATGCAAGTAGAGAGCAACAGCTATAACTTCCTGTTGCTAAGTTCCCCGAAGGAAGTGTTCATGGTTGAATTGGAAATTGAGATTCCCACCCCTTTTGATCCATTTGCTGAAGCTAAAGAATCAGATGCTCCTGGTGCCAATTCATATGTTCATATTCGAATTCAGCAAAGAAATGGTAAGAAAAGCCTAACTACAGTTCAAGGGTTGAAGAAAGAGTTTAGCTACGAAAAGATTCTGAAGGACCTGAAGAAAGTGTTTTGTTGCAATGGTAATGTTGTGCAAGACAAGGAATTGGGTAAGATAATTCAGCTACAAGGTGATCAGCGCAAGAATGTTTCTCAATTTCTCCTTCAATCAGGTCTTGTGAGGAAGGATCAAATCAAGATTCATGGTTTTTAA 399 0.3885 MQVESNSYNFLLLSSPKEVFMVELEIEIPTPFDPFAEAKESDAPGANSYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKVFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLLQSGLVRKDQIKIHGF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1069 132 Gene3D - 16 132 - -
Lal11g1069 132 SUPERFAMILY eIF1-like 20 132 IPR036877 GO:0003743|GO:0006413
Lal11g1069 132 CDD eIF1_SUI1 48 131 IPR005874 GO:0003743
Lal11g1069 132 Pfam Translation initiation factor SUI1 47 120 IPR001950 GO:0003743|GO:0006413
Lal11g1069 132 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 21 132 - -
Lal11g1069 132 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 26 132 IPR005874 GO:0003743
Lal11g1069 132 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 21 132 - -
Lal11g1069 132 ProSiteProfiles Translation initiation factor SUI1 family profile. 50 120 IPR001950 GO:0003743|GO:0006413
Lal11g1069 132 PIRSF Transl_init_SUI1_Euk 20 132 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1069 Lal-Chr11 14317751 14319588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1069 21 132 Eukaryotic Initiation Factors Gene Family AT5G54940 83.036 3.61e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1069 K03113 - gmx:100791423 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1069 11 14317751 14319588 Lal11g1069 11 14317751 14319588 ECH
Lal11g1069 11 14317751 14319588 Lal6g0075 6 440872 452958 PCT
Lal6g0075 6 440872 452958 Lal11g1069 11 14317751 14319588 PCT