Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1065 ATGGGTAGTTGCTTAAGTAAAGGTAAAGATTCAGAAGCAGAATTCATTGGTCAAAGACATGTTGGATCTGCTACTGGTGTGAACAATCACAAGACTCATGAAACTTATGCAAACCAATCAACACCAACACAAACTCATCAACCTTATCAGTTACCTGAAAAGCCTCAGGTTCCTGTTCCAAGCCCAAAGCTAGACACAATCCTTGGGAAGCCATTTGAGGATGTGAAACAATTCTACTCACTTGGTAAAGAATTGGGTAGAGGGCAATTTGGGGTAACATATCTATGTACTGAAAATTCAACTGGTTTGTTATATGCATGTAAGTCAATCTCAAAAAAGAAACTTGTTAATAGATCTGATAAGGAGGATATAAAGAGAGAGATTCAGATTATGCAGCATTTGAGTGGTCAACCTAACATTGTTGAGTTCAAAGGTGCTTATGAGGATAAGCATTCTGTGCATGTTGTTATGGAGCTGTGTGCTGGTGGTGAACTTTTTGATAGGATTATTGCTAAAGGGCATTATAGTGAAAGGGCTGCTGCTTCTATATGTAGACAAATTGTTAATGTTGTTCATATTTGTCATTTCATGGGTGTGATGCATAGGGATCTCAAGCCAGAGAATTTCTTGTTGTCTAGTAAGGATGAAAATGCTCTTCTCAAGGCTACTGATTTTGGCTTGTCTGTTTTCATTGAAGAAGGAAAACTGTATCGTGATATAGTTGGGAGTGCTTATTATGTTGCTCCAGAAGTACTAAGGCGTCGATGTGGGAAGGAAATTGATATATGGAGTGCAGGAGTCATGTTGTATATCTTACTTAGTGGTGTTCCTCCATTTTGGGCTGAGACTGAAAAGGGAATATTTGATGCCATATTGGAAGGTGTTATTGATTTTGAAAGTCAACCATGGCCTAATATATCAGACAGTGCTAAGGACCTTGTTCGGAAGATGCTTATACAGGATCCGAAGAAACGCATTACTGCTACTCAAGTTCTTGATCACCCATGGATTAAAGATGGAAATGCTTCTGACAAGCCAATAGCCAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCTATGAATAAGCTAAAGAAACTTGCTCTGAAGGTCATTGCTGAGAATATGTCTGCAGAAGAGATCCAAGGTTTAAAGGCAATGTTTACAAATATGGACACTGACAAGAGTGGTTCAATCACCTATGAAGAACTAAAGGTGGGATTGCAAAGACTTGGTTCAAAGCTTACAGAGGCTGAAGTAAAGCAACTTATGGAAGCTGCTGATGTAGATGGAAATGGAACAATTGACTACATAGAATTCATCACTGCTACAATGCATAGACACAGATTAGAAAGAGATGACCACCTTTACAAAGCCTTCCAATATTTTGATAAAGACAACAGTGGGTTTATTACAGGAGATGAATTGCAAACTGCCATGAAAGAATATGGTATGGGTGATGATGCCACAATCAAGGAAATTATATCTGAAGTTGATACAATTATATCTGAAGTGGATACAGATCATGATGGAAGAATCAACTATGAAGAATTCTGTGCAATGATGAGAAGTGGAAACCAACATGCTAAGCTATTCTAA 1599 0.3834 MGSCLSKGKDSEAEFIGQRHVGSATGVNNHKTHETYANQSTPTQTHQPYQLPEKPQVPVPSPKLDTILGKPFEDVKQFYSLGKELGRGQFGVTYLCTENSTGLLYACKSISKKKLVNRSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDKHSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKLYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVMLYILLSGVPPFWAETEKGIFDAILEGVIDFESQPWPNISDSAKDLVRKMLIQDPKKRITATQVLDHPWIKDGNASDKPIASAVLSRMKQFRAMNKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGSITYEELKVGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDDHLYKAFQYFDKDNSGFITGDELQTAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFCAMMRSGNQHAKLF 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1065 532 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
Lal11g1065 532 SMART serkin_6 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1065 532 Gene3D - 345 529 - -
Lal11g1065 532 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Lal11g1065 532 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Lal11g1065 532 Gene3D Phosphorylase Kinase; domain 1 81 164 - -
Lal11g1065 532 SUPERFAMILY EF-hand 376 523 IPR011992 -
Lal11g1065 532 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Lal11g1065 532 CDD EFh 458 523 IPR002048 GO:0005509
Lal11g1065 532 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Lal11g1065 532 ProSiteProfiles Protein kinase domain profile. 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g1065 532 ProSitePatterns EF-hand calcium-binding domain. 428 440 IPR018247 -
Lal11g1065 532 Pfam EF-hand domain pair 384 444 IPR002048 GO:0005509
Lal11g1065 532 Pfam EF-hand domain pair 454 523 IPR002048 GO:0005509
Lal11g1065 532 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 528 - -
Lal11g1065 532 SMART efh_1 383 411 IPR002048 GO:0005509
Lal11g1065 532 SMART efh_1 419 447 IPR002048 GO:0005509
Lal11g1065 532 SMART efh_1 455 483 IPR002048 GO:0005509
Lal11g1065 532 SMART efh_1 497 525 IPR002048 GO:0005509
Lal11g1065 532 MobiDBLite consensus disorder prediction 38 59 - -
Lal11g1065 532 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-LIKE 33 528 - -
Lal11g1065 532 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Lal11g1065 532 CDD STKc_CAMK 78 336 - -
Lal11g1065 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lal11g1065 532 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Lal11g1065 532 SUPERFAMILY Protein kinase-like (PK-like) 78 357 IPR011009 -
Lal11g1065 532 Gene3D Transferase(Phosphotransferase) domain 1 165 344 - -
Lal11g1065 532 ProSiteProfiles EF-hand calcium-binding domain profile. 415 450 IPR002048 GO:0005509
Lal11g1065 532 Pfam Protein kinase domain 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1065 Lal-Chr11 14283352 14289365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1065 38 532 EF-hand Containing Proteins AT3G20410 76.108 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal11g1065 Pkinase 1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1065 K13412 - gmx:100798651 910.212