Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1042 ATGGAAATTGGGAGAGAAAATGAGATTGAGGATATATCAATGTCACTCCCTTCTAGGAGCAATGACTTTAGTCACAATAAGGAGTTCATGTCTCAACCATACCTTAGGACTAGGTACACTGAGATTGATATTCAAGTTCAAGATTCTAGTTTCAACCAAAATCATCCCCTCCCCATATTTCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAAATAGAGAAGCAGGTTCCAATAATCCAGTGAAGACAATGGTGTCAAAAGTAGCAACAAAACTCACTATGGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGTAGTGGAAAAACAACCTTGTTGAGAGTTATAAGTGGAAGATTACAAGAAAATACAAAGGGAAAAATAACTTATAATGATGTTCCATATACACCAGCTGTTAAGAGAAGGATTGGATTTGTGGCACAAGAAGATGTGCTTTTCCCACAATTAACTGTAGAAGAAACTTTAGTCTTCTCTGCATTGTTAAGGTTGCCAACCACTATGAGCAAGCAGCAAAAATATGCCAAAGTTGACACCACTATCAAGGAGTTAGGCCTAGAAAGATGTCGCGACACAAAAATCGGTGGAGGATTTCTCAAAGGGATATCAGGAGGAGAAAGGAAGAGAACAAGCATAGGGTATGAAATTCTTGTTGATCCTTCATTGCTGCTGCTTGATGAACCAACTTCAGGCCTTGATTCCACTACAGCAAACAAACTCCTACTCACTCTTCAAGGACTAGCTAAGGCTGGAAGGACCATAATCACAACAATACACCAGCCATCTAGTAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGGTATCCTGTTTATTATGGTAAGGCTAGAGAATCACTAGAGTACTTTTCATCGTTGAGGTTCGTCCCGGAAATACCGATGAATCCTGCAGAGTTCTTGATTGACTTGGCAACTGGACAAGTGAATGATATGACTGTTCCAGCAGATATTTTTGAAGATCAAGAATCTATTGACCCTTCAAAAGCTGTTATTAAATATCTACAACACAAGTACAAAACTTTGCTGGAGCCAAAAGAAAAAGAAGAGAACCATGGAACAGAAAACACACCAGAACATCTTCAACTAGCTATTCAAGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAATTCATGATTCTTTCTAGGAGAACATTCAAAGCAAGATGCAAGGACTATTTTGACAAGTTAAGGCTAGTTCAAGCACTTGGAGTTGCACTTTTATTGGGTCTACTTTGGTGGAAATCTTCAACCAATACTGAGGCTCAACTCAGAGATCAGGTTGGTTTAGTATTCTACATATGTATATTCTGGACATCTTCATGTATTTTTGGAGCTGTCTATGTCTTTCCATTTGAGAAGGTGTACTTGATGAAAGAAAGAAAAGCAGACATGTATAGATTAAGTGTATACTATGCATGCAGCACTATGTGTGACATGGTAGCACATGTTTTCTATCCTACTATTTTCATGGCTATTTTGTACTTCATGGCTGGTTTTAAGAGGACTATTGCATGCTTCTTCTTGACACTACTTACTGTTCTGTTAATAGCTGTAACAAGCCAAGGTGCAGGAGAAATGTTTGGAGCTGCAGTTATGAGTATTAAAAGATCAGGGATGGCTGCTTCTTTGATTCTAATGTTATTTCTCCTTACAGGTGGCTACTATGTTCAGCACATACCAAAGTTCATGAGGTGGTTGAAATATATGTCCTTCATGTACTACGGATTCAGGTTGCTTCTAAAAGTTCAATATTCAGGAGATGAATTATATGATTGTGAAAGCGTTGGAGGGTGCAAGACCCTACAAAGTTCACCTTTATTTGACACTGTCAACTTAAAAGGTGGCTTAAAAGAAGTGTGGATTCTACTAGCCATGGCTTTAAGCTACCGTTTTTTAGCTTATTGGTGCCTCCATAGAAGAATTGATACTACCAACTAA 2040 0.3853 MEIGRENEIEDISMSLPSRSNDFSHNKEFMSQPYLRTRYTEIDIQVQDSSFNQNHPLPIFLKFEDVEYKVRNREAGSNNPVKTMVSKVATKLTMEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVISGRLQENTKGKITYNDVPYTPAVKRRIGFVAQEDVLFPQLTVEETLVFSALLRLPTTMSKQQKYAKVDTTIKELGLERCRDTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTTANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARESLEYFSSLRFVPEIPMNPAEFLIDLATGQVNDMTVPADIFEDQESIDPSKAVIKYLQHKYKTLLEPKEKEENHGTENTPEHLQLAIQVKKEWTLSWLDQFMILSRRTFKARCKDYFDKLRLVQALGVALLLGLLWWKSSTNTEAQLRDQVGLVFYICIFWTSSCIFGAVYVFPFEKVYLMKERKADMYRLSVYYACSTMCDMVAHVFYPTIFMAILYFMAGFKRTIACFFLTLLTVLLIAVTSQGAGEMFGAAVMSIKRSGMAASLILMLFLLTGGYYVQHIPKFMRWLKYMSFMYYGFRLLLKVQYSGDELYDCESVGGCKTLQSSPLFDTVNLKGGLKEVWILLAMALSYRFLAYWCLHRRIDTTN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1042 679 Pfam ABC transporter 103 253 IPR003439 GO:0005524
Lal11g1042 679 Pfam ABC-2 type transporter 282 345 IPR043926 GO:0140359
Lal11g1042 679 SMART AAA_5 112 303 IPR003593 -
Lal11g1042 679 MobiDBLite consensus disorder prediction 1 20 - -
Lal11g1042 679 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 325 IPR003439 GO:0005524
Lal11g1042 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 9 675 - -
Lal11g1042 679 Pfam ABC-2 type transporter 410 618 IPR013525 GO:0016020|GO:0140359
Lal11g1042 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 9 675 - -
Lal11g1042 679 Gene3D - 88 320 IPR027417 -
Lal11g1042 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1042 Lal-Chr11 14039926 14044757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1042 101 286 Calmodulin-binding Proteins AT2G36910 29.474 1.32e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1042 K05681 - gmx:100806094 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1042 11 14039926 14044757 Lal11g1042 11 14039926 14044757 ECH