Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1031 ATGAATTCCCTTATGAGACAACATGGTATAGGGATTACTGGTTCTGATATTGTTTTGAGGCAAAAATTTGCAGCACCATTTCAGCCACGTTCATTTTTACCATCTTTGTCAAGACAAAAAAAGCCTGAGACATGTTCTTTTGTTTCAGTGCAAAGTTTGCACCTTGCTTCTCTTGGTGTTGGAAATTCTAGAAGGGTTGATTTGGTAAAGTGTGAAGCATATGATGCAGATAAATCAGAGGTTGAAAGTGGTGGTGGAGGAACACAACCATTAGAGGCTGCAAAAAAGGCCAAAATTGGGTTATATTTTGCAACATGGTGGGCACTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCTTACCCATACCCTTGGATTACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATTTCTTGGGCCACCAAGATAGCTGAGGCACCTAACACTGATTTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATCGGACATGTAGCGGCAACGGTTAGTATGTCAAAAGTTGCAGTGTCCTTTACTCATATCATCAAGAGTAGTGAGCCTGCTTTTAGTGTACTGGTCTCAAGATTTCTTTTGGGTGAGACCTTCCCTTTGTCGGTCTATCTGTCCATACTTCCAATCATTGGTGGATGTGCACTTACTGCTGCCACTGAGCTCAATTTCAATATGATCGGTTTTATGGGGGCTATGATATCAAATGTGGCATTTGTACTCCGGAACATCTTTTCGAAAAGGGGCATGAAAGGAAAGTCTGTTAGTGGAATGAACTACTATGCTTGCCTATCTATTTTGTCCCTTGCAATTCTCACACCGTTCGCGATTGCCGTGGAAGGACCGCAGTTATGGGCAGCTGGATGGAAAACAGCTATCTCTCAAGTTGGACCTCAATTCATATGGTGGGTAGCAGCTCAAAGTGTATTCTATCATCTATACAATCAAGTGTCATACATGTCCTTGGATGAGATCTCTCCTTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTTCATACACCAATTCAACCCATTAATGCTCTTGGTGCTGCTATTGCTATCCTTGGAACCTTCTTATACTCACAGGCTAAACAATAG 1173 0.4092 MNSLMRQHGIGITGSDIVLRQKFAAPFQPRSFLPSLSRQKKPETCSFVSVQSLHLASLGVGNSRRVDLVKCEAYDADKSEVESGGGGTQPLEAAKKAKIGLYFATWWALNVVFNIYNKKVLNAYPYPWITSTLSLACGSLMMLISWATKIAEAPNTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSSEPAFSVLVSRFLLGETFPLSVYLSILPIIGGCALTAATELNFNMIGFMGAMISNVAFVLRNIFSKRGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQLWAAGWKTAISQVGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPIQPINALGAAIAILGTFLYSQAKQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1031 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 232 - -
Lal11g1031 390 Pfam Triose-phosphate Transporter family 98 386 IPR004853 -
Lal11g1031 390 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 21 389 - -
Lal11g1031 390 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 98 389 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lal11g1031 390 PANTHER SOLUTE CARRIER FAMILY 35 21 389 - -
Lal11g1031 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 289 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1031 Lal-Chr11 13905485 13913352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1031 34 389 Antiporters AT5G54800 76.011 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1031 K15283 - gmx:100801832 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1031 11 13905485 13913352 Lal11g1031 11 13905485 13913352 ECH
Lal11g1031 11 13905485 13913352 Lal18g1548 18 17215962 17220464 PCT
Lal11g1031 11 13905485 13913352 Lal22g0090 22 558598 563198 PCT
Lal18g1548 18 17215962 17220464 Lal11g1031 11 13905485 13913352 PCT
Lal22g0090 22 558598 563198 Lal11g1031 11 13905485 13913352 PCT